Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi202g00016 ATGGGCTTTCTCCGGCGTCTTTTCGGCGCCAAAAAATCGGGTCCTCCCTCTGACGGGTCGGGTTCTAAATCTGGCGGCAAGGACAAAAGGAGAAGATGGAGCTTCGGCACACACAGCATCAAGAACAAGGCACTCCCACCACCCCCCGTCGTCAACCACTTTGACCTCTCCACCTCCTTGGACGCCAACAAACATGCCATCGCTGTTGCCGCCGCTACCGCCGCCGTCGCCGAGGCCGCTCTCGCCGCTGCCCACGCCGCCGCTGAGGTAGTCAGACTGACAAGCGGCGGTGTCGGCGGAAGTAGCACTGGCAGCAGGCCCGCCACCGCGGCGCATGTTGGCCAGCGGCGGTGGCTGGAGTTGACCGCCGCCGTTAAGATACAGTCGGCGTTCCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCACTAAAAGCTTTGGTGAAGTTGCAAGCATTGGTTAGGGGTCACATTGTGAGAAAGCAAACTGCAGATATGCTCAGGCGCATGCAAACATTGGTGCGACTTCAGGCCCAGGCACGTGCAAGTCGTGCGCACTTGTCAGATAATATGCATTCTTTCAAGTCTTCACTTTCTCGTTACCCTGTCCCTGAAGAACATGAGCACCCACTTCGTGCCTACAGTACAAAATTCGATGGTTCTTCTATCCTGAAGAGATGTAGTTCCAATGCAAATTTTAGGAACATTGATTCAGAGAGAACACGGTTTGGTTCCAAGTGGTTAGACAGTTGGATGGAAGATAATGTGTGCAGCCAAACCGGAGATGCTTCATTGAAAAATGGACACACTGATGATGATAGAAGTGACAAGATTCTTGAAGTAGATACTTGGAAGCCACACTTCAACTCTCACCATAGTAGCAGCTCCTTTCAGACAGCACATTATCATTTGAGTTCTGATTATAATAATAATGAGAACTTTATGGCTTATGAATCTCCATCAAAACGTTCAACAAAGGCTCTAAATCAAGGTCACTCATCAAGGGAGGTGTTACCGATAAACTCTTTGAAGTTTCACAAAGGAAAAGAAGAAGTATCTTCTTCTCGAACTGCTGATAATAGTCCAATAGCATTTTCTGCCTCGTCTAGAACAGCAAGTGGTGCAAGGAGAGGTCCCTTTACGCCTACCAGGAGTGAGTGTTCATGGGGTTTCTTCAGTGGCTATTCGGGTTACCCCAATTACATGGCAAACACTGAATCTTTTCGAGCTAAGGTTAGATCACAGAGTGCACCAAGACAAAGGTTAGAGTTTGACAGATACGGTTCCACTAGGAGGCCTTTTCAGGGTCTTTGGGATGTGGGGCCTAACTCAGATCAGGATTCTGATTTAAGGAACAAAGTCTTACCTACCTCGAGCCGTTTGAACAGAATTGAGAGTACCAATTTGAGTTGA 1410 0.4894 MGFLRRLFGAKKSGPPSDGSGSKSGGKDKRRRWSFGTHSIKNKALPPPPVVNHFDLSTSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGVGGSSTGSRPATAAHVGQRRWLELTAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQAQARASRAHLSDNMHSFKSSLSRYPVPEEHEHPLRAYSTKFDGSSILKRCSSNANFRNIDSERTRFGSKWLDSWMEDNVCSQTGDASLKNGHTDDDRSDKILEVDTWKPHFNSHHSSSSFQTAHYHLSSDYNNNENFMAYESPSKRSTKALNQGHSSREVLPINSLKFHKGKEEVSSSRTADNSPIAFSASSRTASGARRGPFTPTRSECSWGFFSGYSGYPNYMANTESFRAKVRSQSAPRQRLEFDRYGSTRRPFQGLWDVGPNSDQDSDLRNKVLPTSSRLNRIESTNLS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi202g00016 469 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
Gabi202g00016 469 SMART iq_5 119 141 IPR000048 GO:0005515
Gabi202g00016 469 SMART iq_5 142 163 IPR000048 GO:0005515
Gabi202g00016 469 Pfam Protein of unknown function (DUF4005) 361 421 IPR025064 -
Gabi202g00016 469 MobiDBLite consensus disorder prediction 354 377 - -
Gabi202g00016 469 MobiDBLite consensus disorder prediction 1 32 - -
Gabi202g00016 469 MobiDBLite consensus disorder prediction 347 380 - -
Gabi202g00016 469 PANTHER IQ-DOMAIN 5-RELATED 26 442 - -
Gabi202g00016 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 165 IPR027417 -
Gabi202g00016 469 Gene3D - 120 173 - -
Gabi202g00016 469 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Gabi202g00016 469 Pfam IQ calmodulin-binding motif 123 141 IPR000048 GO:0005515
Gabi202g00016 469 Pfam IQ calmodulin-binding motif 144 161 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi202g00016 Gabi-Chr202 114828 119298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi202g00016 1 437 IQD Protein Family AT5G62070 47.982 4.05e-67 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi202g00016 - - gmx:100783694 563.533