Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi202g00007 ATGGCACCTTCTCGGGTGGCTGGAGGCTTAACCCAATCATCATCAAGTTCTGGAATATTCTTTCAAGGAGATGGGCAGTCACAGAATGTAGTTAATTCTCACTTGAGCTCATCTTTTGGTAACTCATCTAACATGGCTCCTGGAACTGGGCGTTCACATCTGGGTCCGGTTTCTGGGGATATGAATAATGCAGTTTTAAACAGTGTGGCAAACTCTGCACCAAGTGTTGGAGCCAGTTCTTTAGTCACAGATGCTAATTCTGCACAATCTGGAGGGTCATCAGTTATGGACGGTTCTTCTGTAGCACAACAGAGCTCTCATCAAGATCAGAATGTTCAACAATTGCAGCAGAATCAGCGGCAGCCACAAGGTGCTTCTAGTGCTACGTCTTTGCTTCCATCTCAAACTGGCCCAGCTCCGCTCCCAATGGGTGCACGAGTACCAGGATCTTTCATTCAAGATCAAAATAATTTATTATCCCCGCCGCAGAAGAAACCTAGGCTGGATATCAAGCAGGAAGATATAATGCAACAGCTTCTTCAGAGACAAGACCCCATGCAGTTCCAGGGTCGTAATCCACAATTACAGGCTTTGCTTCAGCATCAGCAGAGACTAAGGCAGCAACAATTCCTTCAATCAATGCCACAGTTACAGCGAGCGCATTTGCAACAACAACAACAGCAGCAACAACAACAAATGCAATTGAGGCAGCAATTACAGCAACAAGTAATGCAGCCGTCATCTGGTGCAAAGCGCCCATATGACAGTGGTGTTTGTGCCCGTCGATTGATGCAATACCTCTATCATCAAAGGCAACGACCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGAAACGGTGGTGCTTGTCAATGTATGAGAATGTTGGACATCATGCACTTGGTGTTTTCCCCCAAGCAGCTATGGATGCATGGCAGTGCGATATATGCGGTTCTAAATCTGGAAGAGGATTTGAGGCGACTTTTGAAGTACTCCCTAGGCTTAATGAAATCAAATTTGGTAGTGGTGTGATCGACGAACTTCTGTTCTTGGACTTGCCACGTGAATATAGATTTCCTTCTGGTGTATTGATGTTAGAATATGCAAAAGCAGTTCAGGCGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAGGGTCAACTTCGTATAGTATTCACGCAAGATCTGAAGATATTATCTTGGGAGTTTTGTGCAAGGCGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAACCAATTGGTTCAAGTAGCACAAAAATGCCAAAGTACAATTGCTGAAAGTGGATCTGATGGGATTTCTCAGCAGGATTTGCAAACAAATAGCAATATGGTATTAACAGCTGGGCGACATCTTGCGAAGAGTTTGGAGTTACAGTCGTTAAATGACTTGGGTTTCTCCAAAAGATATGTGAGATGTTTGCAGATAGCTGAGGTTGTCAATAGCATGAAAGACCTGATAGATTTCTGCCAGGAGCACAAAGTTGGCCCAATTGAAAGCTTGAAAAATTATCCTCGACATGCTACTGTTGCCAAGCTTCAGATGCAAAAGATGCAGGAGATGGAACAAGTAGCAAATGTTCAAGGTCTGCCAACAGATCGAAACACACTTAATAAGCTAATGGCAATGCATCCTGGCTTGAACAGTAAAATCAACAATAATCATAATATGGGTAATCGTGGTGCTATAAGTGGATCGGCACAAGCTGCTTTGGCACTGACCAACTACCAGAATCTTCTCATGAGGCAAAACTCGATGAATTCAAATTCTGGCTCTGTCCAGCGAGAAGGATCGTCGTCTTTCAATAATGCAAACCAGAGTCCATCTTCAACCTTGCAAGGTGCTGCTGGAGCTGCTGCTTTAATTCCAGGGTCAATGCAGAACTTACCAGTTAGTGGATTTTCCAGTCCCCATCTGCAACAGCATCCGCAACACCAGATGCAACAGCAGCAGCAACAGCAGCAGCAACAGCAGCTGCAACAACTTCAACAACGTTCTCTAAGTGCAAATAGCTTACTGCAACAAAGTCATTCACAGGGCTCCCAAGGAAATCAGGCGCTACAACAGCAGATGATCCAGCAACTGCTGCACGAGATGTCTAATAACAGTGGAGGGGTGCAGCCCCAGTCCCTTGGTGGACCCAATGCAAATGGGAGTATGGCAAAGAATGGGATGACCTTTGGAGGCCAGATTCCACCAGTAAATGGAGGTACTGCTAATGTTTCGGGAAGTAACGGACCTGTTCCTAGCCGGAGCAACAGCTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGAAACAATGGATTTAACCAGAGAACATCTGATATGCAACAAAATCTCCATTTGCCAGAAGATGTCATTCAGGATATTGCCCATGATTTTGCGGATAATGGCTTTTTTAACAGTGATCTAGATGATAACATGGGTTTTGGGTGGAAGGCTTGA 2514 0.4467 MAPSRVAGGLTQSSSSSGIFFQGDGQSQNVVNSHLSSSFGNSSNMAPGTGRSHLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSAQSGGSSVMDGSSVAQQSSHQDQNVQQLQQNQRQPQGASSATSLLPSQTGPAPLPMGARVPGSFIQDQNNLLSPPQKKPRLDIKQEDIMQQLLQRQDPMQFQGRNPQLQALLQHQQRLRQQQFLQSMPQLQRAHLQQQQQQQQQQMQLRQQLQQQVMQPSSGAKRPYDSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSMYENVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPREYRFPSGVLMLEYAKAVQASVYEQLRVVREGQLRIVFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRHLAKSLELQSLNDLGFSKRYVRCLQIAEVVNSMKDLIDFCQEHKVGPIESLKNYPRHATVAKLQMQKMQEMEQVANVQGLPTDRNTLNKLMAMHPGLNSKINNNHNMGNRGAISGSAQAALALTNYQNLLMRQNSMNSNSGSVQREGSSSFNNANQSPSSTLQGAAGAAALIPGSMQNLPVSGFSSPHLQQHPQHQMQQQQQQQQQQQLQQLQQRSLSANSLLQQSHSQGSQGNQALQQQMIQQLLHEMSNNSGGVQPQSLGGPNANGSMAKNGMTFGGQIPPVNGGTANVSGSNGPVPSRSNSFKAASNSDSSAAGGNNGFNQRTSDMQQNLHLPEDVIQDIAHDFADNGFFNSDLDDNMGFGWKA 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi202g00007 837 Pfam LIM-domain binding protein 262 522 IPR029005 -
Gabi202g00007 837 PANTHER LIM DOMAIN-BINDING PROTEIN 42 823 IPR029005 -
Gabi202g00007 837 MobiDBLite consensus disorder prediction 83 167 - -
Gabi202g00007 837 Coils Coil 222 242 - -
Gabi202g00007 837 MobiDBLite consensus disorder prediction 7 49 - -
Gabi202g00007 837 MobiDBLite consensus disorder prediction 1 59 - -
Gabi202g00007 837 Coils Coil 665 685 - -
Gabi202g00007 837 MobiDBLite consensus disorder prediction 721 796 - -
Gabi202g00007 837 MobiDBLite consensus disorder prediction 753 796 - -
Gabi202g00007 837 MobiDBLite consensus disorder prediction 647 683 - -
Gabi202g00007 837 MobiDBLite consensus disorder prediction 721 744 - -
Gabi202g00007 837 MobiDBLite consensus disorder prediction 606 634 - -
Gabi202g00007 837 MobiDBLite consensus disorder prediction 83 136 - -
Gabi202g00007 837 MobiDBLite consensus disorder prediction 648 683 - -
Gabi202g00007 837 MobiDBLite consensus disorder prediction 688 707 - -
Gabi202g00007 837 MobiDBLite consensus disorder prediction 606 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi202g00007 Gabi-Chr202 55366 65258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi202g00007 254 528 C2H2 Transcription Factor Family AT1G43850 60.364 1.71e-111 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi202g00007 - - pper:18787712 1122.07