Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi202g00006 ATGGCACCTTCTCGGGTGGCTGGAGGCTTAACCCAATCATCATCAAGTTCTGGAATATTCTTTCAAGGAGATGGGCAGTCACAGAATGTAGTTAATTCTCACTTGAGCTCATCTTTTGGTAACTCATCTAACATGGCTCCTGGAACTGGGCGTTCACATCTGGGTCCGGTTTCTGGGGATATGAATAATGCAGTTTTAAACAGTGTGGCAAACTCTGCACCAAGTGTTGGAGCCAGTTCTTTAGTCACAGATGCTAATTCTGCACAATCTGGAGGTCCCCATTTGCAGAGAAGTGCAAGCTTTAATACAGATTCGTACTTACGTTTACCTGCCTCACCCATGTCATTCACATCAAATAATATTAGTATTTCAGGGTCATCAGTTATGGACGGTTCTTCTGTAGCACAACAGAGCTCTCATCAAGATCAGAATGTTCAACAATTGCAGCAGAATCAGCGGCAGCCACAAGGTGCTTCTAGTGCTACGTCTTTGCTTCCATCTCAAACTGGCCCAGCTCCGCTCCCAATGGGTGCACGAGTACCAGGATCTTTCATTCAAGATCAAAATAATTTATTATCCCCGCCGCAGAAGAAACCTAGGCTGGATATCAAGCAGGAAGATATAATGCAACAGCTTCTTCAGAGACAAGACCCCATGCAGTTCCAGGGTCGTAATCCACAATTACAGGCTTTGCTTCAGCATCAGCAGAGACTAAGGCAGCAACAATTCCTTCAATCAATGCCACAGTTACAGCGAGCGCATTTGCAACAACAACAACAGCAGCAACAACAACAAATGCAATTGAGGCAGCAATTACAGCAACAAGTAATGCAGCCGTCATCTGGTGCAAAGCGCCCATATGACAGTGGTGTTTGTGCCCGTCGATTGATGCAATACCTCTATCATCAAAGGCAACGACCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGAAACGGTGGTGCTTGTCAATGTATGAGAATGTTGGACATCATGCACTTGGTGTTTTCCCCCAAGCAGCTATGGATGCATGGCAGTGCGATATATGCGGTTCTAAATCTGGAAGAGGATTTGAGGCGACTTTTGAAGTACTCCCTAGGCTTAATGAAATCAAATTTGGTAGTGGTGTGATCGACGAACTTCTGTTCTTGGACTTGCCACGTGAATATAGATTTCCTTCTGGTGTATTGATGTTAGAATATGCAAAAGCAGTTCAGGCGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAGGGTCAACTTCGTATAGTATTCACGCAAGATCTGAAGATATTATCTTGGGAGTTTTGTGCAAGGCGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAACCAATTGGTTCAAGTAGCACAAAAATGCCAAAGTACAATTGCTGAAAGTGGATCTGATGGGATTTCTCAGCAGGATTTGCAAACAAATAGCAATATGGTATTAACAGCTGGGCGACATCTTGCGAAGAGTTTGGAGTTACAGTCGTTAAATGACTTGGGTTTCTCCAAAAGATATGTGAGATGTTTGCAGATAGCTGAGGTTGTCAATAGCATGAAAGACCTGATAGATTTCTGCCAGGAGCACAAAGTTGGCCCAATTGAAAGCTTGAAAAATTATCCTCGACATGCTACTGTTGCCAAGCTTCAGATGCAAAAGATGCAGGAGATGGAACAAGTAGCAAATGTTCAAGGTCTGCCAACAGATCGAAACACACTTAATAAGCTAATGGCAATGCATCCTGGCTTGAACAGTAAAATCAACAATAATCATAATATGGGTAATCGTGGTGCTATAAGTGGATCGGCACAAGCTGCTTTGGCACTGACCAACTACCAGAATCTTCTCATGAGGCAAAACTCGATGAATTCAAATTCTGGCTCTGTCCAGCGAGAAGGATCGTCGTCTTTCAATAATGCAAACCAGAGTCCATCTTCAACCTTGCAAGGTGCTGCTGGAGCTGCTGCTTTAATTCCAGGGTCAATGCAGAACTTACCAGTTAGTGGATTTTCCAGTCCCCATCTGCAACAGCATCCGCAACACCAGATGCAACAGCAGCAGCAACAGCAGCAGCAACAGCAGCTGCAACAACTTCAACAACGTTCTCTAAGTGCAAATAGCTTACTGCAACAAAGTCATTCACAGGGCTCCCAAGGAAATCAGGCGCTACAACAGCAGATGATCCAGCAACTGCTGCACGAGATGTCTAATAACAGTGGAGGGGTGCAGCCCCAGTCCCTTGGTGGACCCAATGCAAATGGGAGTATGGCAAAGAATGGGATGACCTTTGGAGGCCAGATTCCACCAGTAAATGGAGGTACTGCTAATGTTTCGGGAAGTAACGGACCTGTTCCTAGCCGGAGCAACAGCTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGAAACAATGGATTTAACCAGAGAACATCTGATATGCAACAAAATCTCCATTTGCCAGAAGATGTCATTCAGGATATTGCCCATGATTTTGCGGATAATGGCTTTTTTAACAGTGATCTAGATGATAACATGGGTTTTGGGTGGAAGGCTTGA 2613 0.4443 MAPSRVAGGLTQSSSSSGIFFQGDGQSQNVVNSHLSSSFGNSSNMAPGTGRSHLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSAQSGGPHLQRSASFNTDSYLRLPASPMSFTSNNISISGSSVMDGSSVAQQSSHQDQNVQQLQQNQRQPQGASSATSLLPSQTGPAPLPMGARVPGSFIQDQNNLLSPPQKKPRLDIKQEDIMQQLLQRQDPMQFQGRNPQLQALLQHQQRLRQQQFLQSMPQLQRAHLQQQQQQQQQQMQLRQQLQQQVMQPSSGAKRPYDSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSMYENVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPREYRFPSGVLMLEYAKAVQASVYEQLRVVREGQLRIVFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRHLAKSLELQSLNDLGFSKRYVRCLQIAEVVNSMKDLIDFCQEHKVGPIESLKNYPRHATVAKLQMQKMQEMEQVANVQGLPTDRNTLNKLMAMHPGLNSKINNNHNMGNRGAISGSAQAALALTNYQNLLMRQNSMNSNSGSVQREGSSSFNNANQSPSSTLQGAAGAAALIPGSMQNLPVSGFSSPHLQQHPQHQMQQQQQQQQQQQLQQLQQRSLSANSLLQQSHSQGSQGNQALQQQMIQQLLHEMSNNSGGVQPQSLGGPNANGSMAKNGMTFGGQIPPVNGGTANVSGSNGPVPSRSNSFKAASNSDSSAAGGNNGFNQRTSDMQQNLHLPEDVIQDIAHDFADNGFFNSDLDDNMGFGWKA 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi202g00006 870 MobiDBLite consensus disorder prediction 721 740 - -
Gabi202g00006 870 MobiDBLite consensus disorder prediction 639 667 - -
Gabi202g00006 870 MobiDBLite consensus disorder prediction 1 59 - -
Gabi202g00006 870 MobiDBLite consensus disorder prediction 7 49 - -
Gabi202g00006 870 Coils Coil 255 275 - -
Gabi202g00006 870 Pfam LIM-domain binding protein 295 555 IPR029005 -
Gabi202g00006 870 PANTHER LIM DOMAIN-BINDING PROTEIN 42 856 IPR029005 -
Gabi202g00006 870 MobiDBLite consensus disorder prediction 127 169 - -
Gabi202g00006 870 MobiDBLite consensus disorder prediction 681 716 - -
Gabi202g00006 870 MobiDBLite consensus disorder prediction 639 668 - -
Gabi202g00006 870 Coils Coil 698 718 - -
Gabi202g00006 870 MobiDBLite consensus disorder prediction 754 829 - -
Gabi202g00006 870 MobiDBLite consensus disorder prediction 786 829 - -
Gabi202g00006 870 MobiDBLite consensus disorder prediction 754 777 - -
Gabi202g00006 870 MobiDBLite consensus disorder prediction 127 200 - -
Gabi202g00006 870 MobiDBLite consensus disorder prediction 680 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi202g00006 Gabi-Chr202 55366 65258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi202g00006 287 561 C2H2 Transcription Factor Family AT1G43850 60.364 3.90e-111 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi202g00006 - - pper:18787712 1194.87