Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2029g00015 ATGAATAATACAGGAAACTTGCAGCTTCTGGATAAGAATTCACAGGTCTTGTGGGACACTTTCTCACGTCCAATCGATACATTGTTGCCAACTCAAATTATGGAGTTAAAAGGCACCCTTACATCTCGACAGAAAGATACCAACTTCTCACAAGGAAGGTTTCAATTTCGCTTGCTTGAGGATGGTAATGCTGTGCTTAATCCTATAAATTTGCCTACCAACTATACTTACGAAGCTTACTACATAAGTGGCACTCGTGATGCTGGCAATGGCACAAACTCTGGTTACCGTGTGATTTTTGATGAATCAGGCTTCTTGTACATAGAGAAAAGGGGCGGTGAGAGGGTTTATATCACTAGCCCAAATGATGTGCTCTCAACCGATTCCTATTATTACAGAGCAACCCTCAATTATGATGGAGTTTTCACCATATCACATCACCCGAAAAGTCCAAGCACAAATCAAAGTTGGACGGTTGTGAAGACATTACCAGATAACATTTGCACGGCTATGGGAGGTGAGAAGGGTATTGGTAGTGGAGTCTGTGGATTCAATAGTATCTGCACTCTCAAAACGGACCAAAGACCAATCTGCAGATGCCCAGAAGGGTATTCTCTTCTTGATTCTACTGATGAGTATGGAAGCTGCATACCAAATTTGGAACCCGTTTGTCAAGGAAGTGGACAGAACTCGCAAGAAGATCTATACTTCATGAAGGAATTGCCAAACACTGATTGGCCTACATCAGATTATGAAATGTATAAACCTTACAATTCAGAAGACTGCAAGGCCTCTTGCTTGCAAGATTGCTTATGTGTTGTTTCTATTTTTAGAACTGATACCTGCTGGAAGAAGAAGCTGCCTCTCTCGAATGGAAGAGAGGATAGAGCGGTAGGAGGATTCGCTTTCATTAAATTGATGAAAAATAATGTTTCATCAGCAAGTCCTCAAAATCCATCTATACAGGTGAATGAAAATAAAAAAGATCAAGATACTTTGATAACTGTGATATCAGTCCTTCTAGGAAGTTCTGTCTTTGTCAATTTCATTCTTTTCACTGCAGTATGTATTGGTTTCTTCTTCTACTACAACAAAAAAAATTCCACCAGTAAAGTTGTTGCAGAGAGCAATTTGCGCAGTTTCACCTATGGAGAGCTTGTGCAAGCAACAGATAACTTCAGAGAAGAATTGGGAAGGGGATCTTGTGGCGTTGTCTTTAAAGGGAATACAGATTTGGCTACTATTGCTGTCAAGAAATTAGACAAAGTGCTCAAAGACAGCGATAAGGAATTCAAAACAGAAGTGAATGTGATAGGACAAACTCATCACAAGAACTTGGTTCGCCTGCTTGGATATTGTGATGAGGGACAACACCGGATTCTGGTGTATGAGTTCTTGAGCAATGGCACTTTAGCAAGTTTCCTTTTTGGAGATTTCAAACCAAATTGGAATCAGAGAGTCCAGATTGCCTTTGGGATTGCAAGAGGGCTCGTTTACTTGCACGAGGAATGCTGCACTCAGATCATTCATTGTGACATAAAGCCACAAAATATACTTCTAGATGAGTATTACAATGCAAGAATATCAGATTTTGGGTTAGCAAAGTTACTGATGATTAATCAAAGCCGCACACAAACTGGCATTCGAGGAACAAAAGGGTATGTTGCGCCAGACTGGTTCAGGAGTGCACCAATCACTGTCAAGGTTGATGTTTATAGTTTTGGTGTGATGCTTCTGGAGATAATCTGCTGTAGAAGAAATGTAGATATGGAGTTTGGCAATGAAGAGAAGGCCATTTTAACTGATTGGGCTTATGACTGCTATAGAGCAAGAAGAATTGACATCTTGGTTGATAATGATGATGAGGCTATCAATGACATGAAGAGGCTTGAAAGGTTTATAATGGTAGCTATTTGGTGCCTTCAAGAAGATCCCTCTCTCAGGCCTACAATGAAGAAGGTTATGTTGATGCTAGAAGGGATAGCTCCTGTTACAGTTCCACCAAGTCCCTGCCCTTATACTTCTGTTTCTGTTAGTAGCAGTTGA 2046 0.4047 MNNTGNLQLLDKNSQVLWDTFSRPIDTLLPTQIMELKGTLTSRQKDTNFSQGRFQFRLLEDGNAVLNPINLPTNYTYEAYYISGTRDAGNGTNSGYRVIFDESGFLYIEKRGGERVYITSPNDVLSTDSYYYRATLNYDGVFTISHHPKSPSTNQSWTVVKTLPDNICTAMGGEKGIGSGVCGFNSICTLKTDQRPICRCPEGYSLLDSTDEYGSCIPNLEPVCQGSGQNSQEDLYFMKELPNTDWPTSDYEMYKPYNSEDCKASCLQDCLCVVSIFRTDTCWKKKLPLSNGREDRAVGGFAFIKLMKNNVSSASPQNPSIQVNENKKDQDTLITVISVLLGSSVFVNFILFTAVCIGFFFYYNKKNSTSKVVAESNLRSFTYGELVQATDNFREELGRGSCGVVFKGNTDLATIAVKKLDKVLKDSDKEFKTEVNVIGQTHHKNLVRLLGYCDEGQHRILVYEFLSNGTLASFLFGDFKPNWNQRVQIAFGIARGLVYLHEECCTQIIHCDIKPQNILLDEYYNARISDFGLAKLLMINQSRTQTGIRGTKGYVAPDWFRSAPITVKVDVYSFGVMLLEIICCRRNVDMEFGNEEKAILTDWAYDCYRARRIDILVDNDDEAINDMKRLERFIMVAIWCLQEDPSLRPTMKKVMLMLEGIAPVTVPPSPCPYTSVSVSSS 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2029g00015 681 Gene3D Transferase(Phosphotransferase) domain 1 466 665 - -
Gabi2029g00015 681 SMART serkin_6 391 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2029g00015 681 FunFam S-receptor-like serine/threonine-protein kinase 362 465 - -
Gabi2029g00015 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Gabi2029g00015 681 Gene3D - 26 160 IPR036426 -
Gabi2029g00015 681 Pfam Protein kinase domain 394 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2029g00015 681 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 666 - -
Gabi2029g00015 681 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 38 IPR036426 -
Gabi2029g00015 681 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 672 - -
Gabi2029g00015 681 ProSiteProfiles Protein kinase domain profile. 391 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2029g00015 681 Gene3D Phosphorylase Kinase; domain 1 358 465 - -
Gabi2029g00015 681 SUPERFAMILY Protein kinase-like (PK-like) 367 659 IPR011009 -
Gabi2029g00015 681 FunFam Serine/threonine-protein kinase 25 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2029g00015 Gabi-Chr2029 107436 109496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2029g00015 359 660 Receptor kinase-like Gene Family AT1G60800 40.645 1.33e-69 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gabi2029g00015 Pkinase 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2029g00015 - - gmx:100811299 1122.84