Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2027g00022 ATGGAGCCTAACTTGGTGTTTCCATTTCCATTCATGTTTCTTATTTCTCTTTGGTTTCTATTGGCTCTTCATAGCAATGCTGAGAGTTCTACATATATAGTCCATATGGACAAATCCCTCTTTCCTCAGGTTTTCACAACACATGAAGATTGGTTTGAGTCCACCATTCATTCCATAAAATCAGCAACAGTTGATCACCAATTCAAGCAATCACAAGCACTAGTGTACACCTATAATCATGCCATGTATGGCTTTAGTGCAGTGCTATCTTCAGATGAGTTGGAGACTCTAAAGAATGCTCATGGCTTTGTTGCAGCATATCAAGACAGAACTGCCACCATTGACACCACTCACACCTTTGAATTTCTTTCTCTAGATGCTTCCAGTGGTTTATGGCATGCTTCAAATTTTGGGGATGATGTCATTGTTGGTGTTATTGACTCTGGTTTGTGGCCTGAGAGTGAAAGCTTTAAAGATGATGGCATGACCAAGAAAATGCCAAAAAAGTGGACAGGAACATGTGAGGCTGGGCAAGAATTTAACACCTCCATGTGCAACTTCAAGCTGATTGGAGCTAGATATTTCAACAAGGGTGTTGTTGCTGCAAATCCCAATGTTGGAATCAGCATGAACTCAGCTAGAGACAATTTGGGACATGGGACTCACACATCATCCACTATTGCAGGGAACTATGTTAATGGAGCCTCTTATTTTGGCTATGCTAAAGGGGTAGCCAGAGGCATTGCACCAAGAGCTAGGCTTGCAATGTACAAGGTTGTTTGGGAAGAGGGGCGTTTAGCCTCTGATGTATTGGCTGGGATGGACCAAGCTATTTCTGATGGGGTTGATGTGATTTCCATCTCTATGGGTTTTGATGATGTTCCACTTTATGAGGACCCTATAGCAATAGCTTCTTTTGCAGCAATGGAGAAGGGGGTGTTGGTTTCATCTTCTGCTGGAAACTCAGGTCCATATTTTGGTAAATTGCACAATGGAATCCCTTGGGTCCTTACAGTGGCAGCAGGCACCATAGATCGTACATTTGGTAGTTTGGTTCTTGGAAATGGCCAAATCATTATAGGTTGGACCTTGTTTCCAGCAAATGCCATAGTTGAAAATCTTATACTTGTCTACAATAAGACTATATCAGCATGCAACTCAGTGAAGCTGTTATCTAAAGTGGCCACACAAGGGATCATTCTGTGTGACTCAGTGTCACATTCTGTGTTTAGCCAAATGGATTCTGTCACCACAGCCAGTGTGATAGGAGCAGTGTTTATCTCTGATGATCCTGAATTATTTGAAACCACAGATGTCTACTCTCCAAGTATTGTAATCAGCACACAGGATGCACAATCTGTGATCAAGTATGCAAAAAGCCATGAGAATCCCACAGCCAGCATCAAATTTCAGCAAACATTTATTGGAACAAAGCCAGCACCAGCTGCTGCTAGTTACAGTTCAAGAGGTCCTTCACCTACCTATCCTGGTGTCTTAAAGCCTGACATAATGGCACCTGGTACTAATGTTCTTGCTGCTTATGTTCCTAATTTAGAAGCTGCTACAATTGGCACAAATGTGTTCCTATCCAGTGACTACAATTTCATGTCTGGAACATCCATGGCTTGTCCTCATGCTTCTGGTGTTGCTGCTCTTCTGAAGGCTGCACACCCAAATTGGAGTGCTGCTGCTATAAGGTCTGCACTTGTAACCACAGCTAGTCCTTTGGATAATACCCAAAATCCAATTAGGGATAATGGATACCCTTCTCAATATGCTTCCCCTCTTGTTATGGGAGCTGGTGAGATTGATCCTAATAGAGCACTTGATCCAGGTTTGGTATATGATGCCACCCCACAGGACTATGTTAATCTCCTTTGTGCTTTGAAGTACACCAAGAAGCAAATCTTAACCATTACAAGATCAACCTCCTATAACTGTGCAAACCCTTCCTTTGATCTTAACTACCCTTCATTTATAGCTTTTTACAGAAGCAAAACAAGATCATCAGTTCACAAGTTTAGGAGAACTGTGACCAATGTTGGAGATGGTGCTGCTACATATAGAGCCAAGGTGACACAACCCAAGGGCTCTGTGGTGAGAGTGTTACCTGAGAGGTTAACATTCAGATATAAAAATGAGAAGCAGGGTTACTATGTTATGATCAAGTATACCAATTACAAGAAGGAAAATATCACATTTGGGGACCTTGTTTGGATGGAAGATGGTGGAGCACACACTGTTAGGAGCCCCATTGTAGTGGCACCAAGTGGAATTGTATGA 2283 0.4223 MEPNLVFPFPFMFLISLWFLLALHSNAESSTYIVHMDKSLFPQVFTTHEDWFESTIHSIKSATVDHQFKQSQALVYTYNHAMYGFSAVLSSDELETLKNAHGFVAAYQDRTATIDTTHTFEFLSLDASSGLWHASNFGDDVIVGVIDSGLWPESESFKDDGMTKKMPKKWTGTCEAGQEFNTSMCNFKLIGARYFNKGVVAANPNVGISMNSARDNLGHGTHTSSTIAGNYVNGASYFGYAKGVARGIAPRARLAMYKVVWEEGRLASDVLAGMDQAISDGVDVISISMGFDDVPLYEDPIAIASFAAMEKGVLVSSSAGNSGPYFGKLHNGIPWVLTVAAGTIDRTFGSLVLGNGQIIIGWTLFPANAIVENLILVYNKTISACNSVKLLSKVATQGIILCDSVSHSVFSQMDSVTTASVIGAVFISDDPELFETTDVYSPSIVISTQDAQSVIKYAKSHENPTASIKFQQTFIGTKPAPAAASYSSRGPSPTYPGVLKPDIMAPGTNVLAAYVPNLEAATIGTNVFLSSDYNFMSGTSMACPHASGVAALLKAAHPNWSAAAIRSALVTTASPLDNTQNPIRDNGYPSQYASPLVMGAGEIDPNRALDPGLVYDATPQDYVNLLCALKYTKKQILTITRSTSYNCANPSFDLNYPSFIAFYRSKTRSSVHKFRRTVTNVGDGAATYRAKVTQPKGSVVRVLPERLTFRYKNEKQGYYVMIKYTNYKKENITFGDLVWMEDGGAHTVRSPIVVAPSGIV 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2027g00022 760 ProSiteProfiles Serine proteases, subtilase domain profile. 119 609 - -
Gabi2027g00022 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Gabi2027g00022 760 FunFam Subtilisin-like protease SBT1.5 140 353 - -
Gabi2027g00022 760 Gene3D - 345 475 - -
Gabi2027g00022 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 754 IPR045051 -
Gabi2027g00022 760 Pfam Fibronectin type-III domain 653 754 IPR041469 -
Gabi2027g00022 760 SUPERFAMILY Subtilisin-like 115 613 IPR036852 GO:0004252|GO:0006508
Gabi2027g00022 760 Gene3D Peptidase S8/S53 domain 140 622 IPR036852 GO:0004252|GO:0006508
Gabi2027g00022 760 Pfam Subtilase family 138 577 IPR000209 GO:0006508|GO:0008236
Gabi2027g00022 760 CDD Peptidases_S8_3 113 574 IPR034197 -
Gabi2027g00022 760 Pfam Peptidase inhibitor I9 31 112 IPR010259 -
Gabi2027g00022 760 Gene3D - 626 756 - -
Gabi2027g00022 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 114 IPR037045 -
Gabi2027g00022 760 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Gabi2027g00022 760 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Gabi2027g00022 760 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Gabi2027g00022 760 FunFam Subtilisin-like protease SBT1.9 21 115 - -
Gabi2027g00022 760 CDD PA_subtilisin_like 350 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2027g00022 Gabi-Chr2027 214301 216583 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2027g00022 27 757 Subtilisin-like Serine Gene Family AT5G67090 42.477 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2027g00022 - - gmx:100779169 1241.87