Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2027g00011 ATGGAGGAAGATTGGGATCTCCATGCGGTGGTTAGAGGCTGCTCCACCGTTACCTCCACCAACTCCACCACCACCAGCACTACCGCATCATTCTCTGTGTCTTCCTCTGGTTTTGGCACTTGTTACTTGCAGCCTGAAGCTTCCTCTTGTGGGTTCTCTATCTTTGATGGTGAACAAGCAAGCCAAGTTTTGTCACTTTCTGCACACCCCTTTGAAGCAAGAAGCTCCATTGAAGAGTTGCATGAGCTTTGCAAGCCTTTCTTCACCAAATCACAGTCTCTCTCATTGCAAATTCCTAACTTGTCCTCATTGTCTTACTCCTCTGTAACAACACCCAAATCAGCTCAAACACAAGAGAAACAACAACAGCAGCGGAATAAGCAGCCACACTCAGCTGGTTCTCTCACCACCCCACGATCTAAAAGAAGGAAGAACCAGCTTAAGAAAGTTTGTCAAGTGCCAGTTGAGAATCTCTCATCAGATATATGGGCATGGAGGAAATATGGACAAAAACCAATTAAAGGGTCACCATATCCAAGAGGATACTATAGATGTAGCAGTTCAAAAGGATGCTTAGCAAGGAAACAAGTTGAGAGAAACAGATCAGACCCAACAATGTTCATAGTTACCTATACAGCTGAACATAACCACCCTGCTCCTACTCACCGAAACTCTCTTGCTGGATCCACACGCCAGAAGCCATTGACACCTCAAACTGCCACCAACGGAGACTCTGACAAGGCCTTGACAAAACCCTCTTCTCCGGCGACCTCAGGGGCGGAGGATGAGGTTCCAACTCAGGGAGAAAAGTCAGAGAGCAGGGAAGAGAAGGAAGATGTGATGGATGATGAGGAAGAAGATGAATTTGGTTTATCTGATATGGTTCTAACAGATGATTTCTTTGAAAGTTTAGATGAACTGAGTCAACTCAATGCCTCTTCTGCAGTCACTGGAGACTGCTTCACTGATCCCTTTTCAGCTATTGCAATACCTTCTTGGGTGGCTAATAGTGCTGCCACTGCTGCTAGCGGTAGCTGA 1038 0.4605 MEEDWDLHAVVRGCSTVTSTNSTTTSTTASFSVSSSGFGTCYLQPEASSCGFSIFDGEQASQVLSLSAHPFEARSSIEELHELCKPFFTKSQSLSLQIPNLSSLSYSSVTTPKSAQTQEKQQQQRNKQPHSAGSLTTPRSKRRKNQLKKVCQVPVENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTAEHNHPAPTHRNSLAGSTRQKPLTPQTATNGDSDKALTKPSSPATSGAEDEVPTQGEKSESREEKEDVMDDEEEDEFGLSDMVLTDDFFESLDELSQLNASSAVTGDCFTDPFSAIAIPSWVANSAATAASGS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2027g00011 345 SMART WRKY_cls 159 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2027g00011 345 MobiDBLite consensus disorder prediction 109 151 - -
Gabi2027g00011 345 MobiDBLite consensus disorder prediction 109 140 - -
Gabi2027g00011 345 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 310 IPR044810 GO:0003700
Gabi2027g00011 345 Gene3D WRKY domain 143 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2027g00011 345 MobiDBLite consensus disorder prediction 217 261 - -
Gabi2027g00011 345 ProSiteProfiles WRKY domain profile. 154 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2027g00011 345 FunFam WRKY transcription factor 22 143 213 - -
Gabi2027g00011 345 SUPERFAMILY WRKY DNA-binding domain 157 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2027g00011 345 MobiDBLite consensus disorder prediction 214 290 - -
Gabi2027g00011 345 Pfam WRKY DNA -binding domain 161 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2027g00011 Gabi-Chr2027 143517 145311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2027g00011 1 344 WRKY Transcription Factor Family AT4G01250 47.486 1.09e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2027g00011 WRKY 3.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2027g00011 K13425 - gmx:100798084 506.138