Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2027g00003 ATGGCTACCACTCCTTCGCTTCTACACTCATCTGGGTCCTCCTTTCTGGCTCAATTTCGTGCCTTTCCATCTCCATTGTCTTCTTCTTCACTGTTCCCTTATCGAAACAAGCATGGAAGCGCTGTGGTGTCCGTGAAGGCCACTGCTGCTGGGGCTGTTCTGGTAGAGAAGTCTGAGGCTGAGAATGTCAATAGGCTTAAAACAACTTACAAAGAGAAAATTATTCCCTTGCTTATGGAGGAATTCTCTTACACCAACATACACCAGGTGCCTAAAATTGAGAAGATTGTGGTTAACTGCGGTATAGGAGATGCTGCACAAAATGCAAAGGGTTTGGAAGCGGCGATGAATGATCTAGCACAGATCACAGGGCAGAGACCTATTAAGACTCGGGCCAGGGCTTCCGTTGCCACATTCAAGATCAGGGAAGGTCAACCACTTGGGATTGCTGTAACACTCAGAGGAAATGTAATGTACTCATTCCTAGACCGAGTTGTCAACTTGGGACTTCCCAGGACAAGAGATTTCCAAGGTGTGAACCCAAACAGCTTTGATGGACATGGAAATTACAGCATTGGTGTTAAGGACCAGAGTGTGTTCCCAGAGATCAGATCTGATATTGTTGGTAAGGCAAGGGGAATGGATATCTGCATTGCCACAACAGCTAAAACTGATCAAGAAGCACAGAGATTATTGGCTCTTATGGGTATGCCTTTCAGAGAGGGAGGTGGTCCTTCCACCACAGGTAACAAAAAGAAGAAGCTGAAATCTCATCATTTTGATGCAAAATCAAAGGGAAAAGGAAAGAAGTAA 813 0.4514 MATTPSLLHSSGSSFLAQFRAFPSPLSSSSLFPYRNKHGSAVVSVKATAAGAVLVEKSEAENVNRLKTTYKEKIIPLLMEEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLAQITGQRPIKTRARASVATFKIREGQPLGIAVTLRGNVMYSFLDRVVNLGLPRTRDFQGVNPNSFDGHGNYSIGVKDQSVFPEIRSDIVGKARGMDICIATTAKTDQEAQRLLALMGMPFREGGGPSTTGNKKKKLKSHHFDAKSKGKGKK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2027g00003 270 Pfam Ribosomal protein L5 86 142 IPR031310 -
Gabi2027g00003 270 Hamap 50S ribosomal protein L5 [rplE]. 63 241 IPR020930 GO:0003735|GO:0005840|GO:0006412
Gabi2027g00003 270 FunFam 50S ribosomal protein L5 62 241 - -
Gabi2027g00003 270 MobiDBLite consensus disorder prediction 237 270 - -
Gabi2027g00003 270 Pfam ribosomal L5P family C-terminus 146 239 IPR031309 -
Gabi2027g00003 270 Gene3D - 57 241 IPR022803 -
Gabi2027g00003 270 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 67 241 IPR002132 GO:0003735|GO:0005840|GO:0006412
Gabi2027g00003 270 ProSitePatterns Ribosomal protein L5 signature. 119 135 IPR020929 GO:0003735|GO:0005840|GO:0006412
Gabi2027g00003 270 SUPERFAMILY RL5-like 65 240 IPR022803 -
Gabi2027g00003 270 MobiDBLite consensus disorder prediction 251 270 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2027g00003 92 197 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 27.358 8.65e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2027g00003 K02931 - gmx:100800193 442.58