Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2027g00001 ATGTCAATCTTCGATGGAGCTTTCATGAATACAGAGCTCTCCAAACGTACCTCAATCTTCGGTCTCCGTCTCTGGGTTGTCGTCGGAATCCTCGTCGGCATTCTCATCGTTTTCACCCTCTTCCTCCTCTCTCTCTGCCTCGTCTCTCGCCGCCACCGCCGCCGTGCCGGCGCCGGCGCCGGCAACTACAAAGTTGCCAGAGCCCCAGCTGTGCCCAAGGAAATCCAGGAGATAGTGCACCTTCCCGGACCCCACATGACCCGGCAGCCGTACACGGCGGCGACGGTGCCGGAGATTCACGTGGACATCGGCAAGGCTGAGCACCGGGTTGTGGTTCAGTGTGAAAGGGTTTCCAGTGGGGAGAGCAAGAGAACGACGGGGAGTGGGTGTGAAACGACGTCGTCTTTTGGGAGTGGAAGTGTCGTTGGGATTGGGCCTGAGGTATCACATCTCGGGTGGGGGAGATGGTACACTCTGAGGGAATTGGAGGATGCCACTGATGGGTTGTGTGAGAAAAATGTTGTTGGTGAAGGTGGTTATGGTATTGTTTATCATGGGGTGCTCACTGATGGTACCAGAGTTGCTGTCAAGAACCTCTTGAATAACAAGGGCCAAGCTGAGAAAGAATTTAAAGTAGAGGTAGACACAATTGGTCGAGTGCGACACAAAAATCTTGTTAGGTTGCTTGGATACTGTGTTGAGGGAGCCTACAGGATGCTTGTGTATGAATATGTTGACAATGGCAATCTAGAACAATGGCTGCATGGGGATGTTGGAGCTGTAAGCCCATTGACATGGGATATACGCATGAACATTATATTGGGAACTGCAAGAGGATTGGCTTATCTTCATGAGGGTCTTGAACCAAAGGTTGTCCACCGAGATGTGAAATCAAGCAACATACTCCTTGATCGCCAATGGAACTCCAAAGTTTCTGATTTTGGGCTTGCTAAGCTTTTATGTTCTGAGAATAGTTACGTCACAACTCGAGTGATGGGGACATTTGGTTATGTTGCACCAGAGTATGCTTGCACTGGAATGCTGACTGAGAAGAGTGATGTCTATAGCTTCGGGATACTTATAATGGAGATAATTACTGGGAGAAGTCCTGTTGATTATAGTAGACCAAAAGGAGAGGTTAATTTAATAGATTGGTTGAAGACTATGGTTGGTAATAGAAAATCTGAGGAAGTAGTTGATCCTAAGCTACCTGGGATGCCATCTTCAAAGGCTCTTAAACGTGCTCTATTGATTGCTCTTCGGTGTGTTGACCCTGATGCAACAAAGAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCAGATGACCTCTTATTCCATAATGAACGCGGAACTGGGGGAGAATCTTCCCTTTCCCATAATGATTATCAACAAGAGCATAAGGACTCAAGTTTAGATAAAAGGACAGATGAAGGGATCACTGATCAAAGTGAAGATGTTAGTAGCAAAAATCATCATCAGCCCCCCACTAGGTGGAGATGA 1506 0.4768 MSIFDGAFMNTELSKRTSIFGLRLWVVVGILVGILIVFTLFLLSLCLVSRRHRRRAGAGAGNYKVARAPAVPKEIQEIVHLPGPHMTRQPYTAATVPEIHVDIGKAEHRVVVQCERVSSGESKRTTGSGCETTSSFGSGSVVGIGPEVSHLGWGRWYTLRELEDATDGLCEKNVVGEGGYGIVYHGVLTDGTRVAVKNLLNNKGQAEKEFKVEVDTIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGAVSPLTWDIRMNIILGTARGLAYLHEGLEPKVVHRDVKSSNILLDRQWNSKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPKGEVNLIDWLKTMVGNRKSEEVVDPKLPGMPSSKALKRALLIALRCVDPDATKRPKMGHVIHMLEADDLLFHNERGTGGESSLSHNDYQQEHKDSSLDKRTDEGITDQSEDVSSKNHHQPPTRWR 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2027g00001 501 MobiDBLite consensus disorder prediction 449 501 - -
Gabi2027g00001 501 MobiDBLite consensus disorder prediction 462 494 - -
Gabi2027g00001 501 Gene3D Phosphorylase Kinase; domain 1 146 244 - -
Gabi2027g00001 501 CDD STKc_IRAK 175 441 - -
Gabi2027g00001 501 Gene3D Transferase(Phosphotransferase) domain 1 245 451 - -
Gabi2027g00001 501 FunFam Putative receptor-like serine/threonine-protein kinase 245 454 - -
Gabi2027g00001 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Gabi2027g00001 501 ProSiteProfiles Protein kinase domain profile. 169 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2027g00001 501 SUPERFAMILY Protein kinase-like (PK-like) 147 441 IPR011009 -
Gabi2027g00001 501 FunFam Probable serine/threonine-protein kinase At1g01540 149 244 - -
Gabi2027g00001 501 SMART serkin_6 169 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2027g00001 501 PANTHER OS01G0323000 PROTEIN 7 465 - -
Gabi2027g00001 501 ProSitePatterns Protein kinases ATP-binding region signature. 175 197 IPR017441 GO:0005524
Gabi2027g00001 501 Pfam Protein kinase domain 172 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2027g00001 Gabi-Chr2027 4714 7715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2027g00001 110 441 Receptor kinase-like Gene Family AT4G02010 45.536 4.97e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gabi2027g00001 Pkinase 5.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2027g00001 - - gmx:100817295 787.334