Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2022g00021 ATGGAGTGCAACAAAGATGAGGCAGCTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATGCTACTGCAAAAAAGTTTGCTCTCAAGGCTTTAAATTTGTATCCTGCACTGGAGGGTCTTTCCCAGTTTTTGACAACACTCGATGTTTATATCTCTGCCGGGAACAAAATAAGTGGAGAAATGGATTGGTATGGTATTCTTGGAGTTAATCCCTTTGCTGATGATGAGACAGTTAGAAAGCAGTACAGGAAGCTGGCTCTCACTCTTCACCCTGACAAAAACAAGTCTTTAGGTTCAGAGGGTGCATTTAAGCTTGTTTCAGAGGCATGGAGTTTACTATCAGATAAGTTCAGGAAACTAGCATATAACCAGAAAAGGAGTTTGCAAGGATTTCAGCATAATGCTCCCAACCATGTTGGGTCTCAATCAGAAGCACCCAGTTCAAATGGTTTTAAAAATATTAACAAGAATGCAACTTCAAATGTGAGAACTGGAAATAGAAGTGTTCGGCCACCTTCAACCTCCATTCCTACTCCACATAAAAAGGATGGTACCTTTTGGACTATCTGTAACCGGTGCAAGACACATTATGAGTATCTCAGGATTTATTTGAATCATTCCCTTTTATGTCCAAATTGTAATGAAGCTTTTATAGCTATAGAGAAATGTCCACCTCCCAATGTTGTTAGGTCTTCTAATTGGTCTTCTCCGCAACATAATCAGAAGTCCCGACATCATGCTGGATGGAATAACTCAAGTAATCCAGGAAGAACTTGTGCAGTTTCTCAAAACTCACAATCTGGCGGTTCTTCAGGCATGACTTATTTTAATAACACAAACTTCCAGGGGGTTCCTCACTCAAGAATGGCTGGCTTTGTTGGCACAGGTGGATCATCATCTGTTGCTGGTGCAAGTTTTAAGCAGCAGTCAAGTGAGAAAAGAAGAGAATGTGAGGGAGCCGCATCAATTGCTGCATGGCAGAGGACTCAGATGTATAACAGATCTGATGGTTCTTTTAGTAATGTTGAAAAACCTATGAAGAAAATAAGGGCGGATGATACTCACATGAGCATGAGAGATGGAGCAACCAGTTTGGGCTGTTTTCGTGAATTAGGAAAGGATGACATGGGAACAGAAAGGATTTATGGTTTTTCAGGTATTACTAGCAAGAGAGAGTTGTCAATGTTTGAAATACGAATCATGTTGATGGATAAGGCTCGGATTGAAATTCGCAAGAAACTTAAAGAATGGAGATCTATGGCTGAAGCTAAGATTACAAATAAGGACAAAGGAAATAAGAGACAAAAGAGCACGTTTAGTGACAAAATAACTGGTCCAGAGAAGCATGGAGGTTCCAGTATTCATGGTAACAGGCATGTGGACAGTGATTCTATCCCAGTCACATCTGATGACACTGTAGAGGAGAACCAAGCTTTTACAATCAATGTTCCAGATTCTGATTTTCACAATTTTGACTTGGATAGAGCTGAAAATTCCTTTGAGGAGGACCAGGTCTGGGCTGCTTACGATGATGATGATGGAATGCCTAGATATTATGCTAGAATTCAGAAGGTGATCTCCTTGAAGCCATTTAGAATGCGTATTAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGATAGGTTCTGGTTTTTACAAAACTTGTGGGGATTTCAGGATTGGCAGGCATGAAATAACTGAATCATTAAATTCATTTTCACATAAGGTTAGGTGGACAAAAGGCACCAGAGGAGTCGTTCGCATCTTTCCTGGAAAGGGGCAAGTTTGGGCTCTCTATAGAAACTGGTCTCCTGACTGGGATGAAAATACTCCAGATGAAGTGATACACAAGTATGATATGGTGGAGGTGCTTGAAGATTTCAGCGAGGAGGAAGGGCAAGAAGCTCATAATGCTCCAAAGGGCTGTCGAGACTTGGATCCAGCAGCTAACAACACAAGTTAA 1989 0.4103 MECNKDEAARAKEIAERKFSEREYATAKKFALKALNLYPALEGLSQFLTTLDVYISAGNKISGEMDWYGILGVNPFADDETVRKQYRKLALTLHPDKNKSLGSEGAFKLVSEAWSLLSDKFRKLAYNQKRSLQGFQHNAPNHVGSQSEAPSSNGFKNINKNATSNVRTGNRSVRPPSTSIPTPHKKDGTFWTICNRCKTHYEYLRIYLNHSLLCPNCNEAFIAIEKCPPPNVVRSSNWSSPQHNQKSRHHAGWNNSSNPGRTCAVSQNSQSGGSSGMTYFNNTNFQGVPHSRMAGFVGTGGSSSVAGASFKQQSSEKRRECEGAASIAAWQRTQMYNRSDGSFSNVEKPMKKIRADDTHMSMRDGATSLGCFRELGKDDMGTERIYGFSGITSKRELSMFEIRIMLMDKARIEIRKKLKEWRSMAEAKITNKDKGNKRQKSTFSDKITGPEKHGGSSIHGNRHVDSDSIPVTSDDTVEENQAFTINVPDSDFHNFDLDRAENSFEEDQVWAAYDDDDGMPRYYARIQKVISLKPFRMRISWLNSRSNSELGPIDWIGSGFYKTCGDFRIGRHEITESLNSFSHKVRWTKGTRGVVRIFPGKGQVWALYRNWSPDWDENTPDEVIHKYDMVEVLEDFSEEEGQEAHNAPKGCRDLDPAANNTS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2022g00021 662 Gene3D DnaJ domain 63 173 IPR036869 -
Gabi2022g00021 662 Pfam Domain of unknown function (DUF3444) 484 641 IPR024593 -
Gabi2022g00021 662 MobiDBLite consensus disorder prediction 431 447 - -
Gabi2022g00021 662 SUPERFAMILY Chaperone J-domain 62 145 IPR036869 -
Gabi2022g00021 662 MobiDBLite consensus disorder prediction 431 469 - -
Gabi2022g00021 662 MobiDBLite consensus disorder prediction 637 662 - -
Gabi2022g00021 662 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Gabi2022g00021 662 MobiDBLite consensus disorder prediction 235 270 - -
Gabi2022g00021 662 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gabi2022g00021 662 PRINTS DnaJ domain signature 86 101 IPR001623 -
Gabi2022g00021 662 PRINTS DnaJ domain signature 68 86 IPR001623 -
Gabi2022g00021 662 SMART dnaj_3 65 122 IPR001623 -
Gabi2022g00021 662 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Gabi2022g00021 662 PANTHER BNAC03G44070D PROTEIN 1 658 - -
Gabi2022g00021 662 CDD DnaJ 66 119 IPR001623 -
Gabi2022g00021 662 MobiDBLite consensus disorder prediction 136 185 - -
Gabi2022g00021 662 Pfam DnaJ domain 66 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2022g00021 Gabi-Chr2022 140751 150108 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2022g00021 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.197 3.29e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2022g00021 - - gmx:100792212 979.548