Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2022g00020 ATGGAGTGCAACAAAGATGAGGCAGCTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATGCTACTGCAAAAAAGTTTGCTCTCAAGGCTTTAAATTTGTATCCTGCACTGGAGGGTCTTTCCCAGTTTTTGACAACACTCGATGTTTATATCTCTGCCGGGAACAAAATAAGTGGAGAAATGGATTGGTATGGTATTCTTGGAGTTAATCCCTTTGCTGATGATGAGACAGTTAGAAAGCAGTACAGGAAGCTGGCTCTCACTCTTCACCCTGACAAAAACAAGTCTTTAGGTTCAGAGGGTGCATTTAAGCTTGTTTCAGAGGCATGGAGTTTACTATCAGATAAGTTCAGGAAACTAGCATATAACCAGAAAAGGAGTTTGCAAGGATTTCAGCATAATGCTCCCAACCATGTTGGGTCTCAATCAGAAGCACCCAGTTCAAATGGTTTTAAAAATATTAACAAGAATGCAACTTCAAATGTGAGAACTGGAAATAGAAGTGTTCGGCCACCTTCAACCTCCATTCCTACTCCACATAAAAAGGATGGTACCTTTTGGACTATCTGTAACCGGTGCAAGACACATTATGAGTATCTCAGGATTTATTTGAATCATTCCCTTTTATGTCCAAATTGTAATGAAGCTTTTATAGCTATAGAGAAATGTCCACCTCCCAATGTTGTTAGGTCTTCTAATTGGTCTTCTCCGCAACATAATCAGAAGTCCCGACATCATGCTGGATGGAATAACTCAAGTAATCCAGGAAGAACTTGTGCAGTTTCTCAAAACTCACAATCTGGCGGTTCTTCAGGCATGACTTATTTTAATAACACAAACTTCCAGGGGGTTCCTCACTCAAGAATGGCTGGCTTTGTTGGCACAGGTGGATCATCATCTGTTGCTGGTGCAAGTTTTAAGCAGCAGTCAAGTGAGAAAAGAAGAGAATGTGAGGGAGCCGCATCAATTGCTGCATGGCAGAGGACTCAGATGTATAACAGATCTGATGGTTCTTTTAGTAATGTTGAAAAACCTATGAAGAAAATAAGGGCGGATGATACTCACATGAGCATGAGAGATGGAGCAACCAGTTTGGGCTGTTTTCGTGAATTAGGAAAGGATGACATGGGAACAGAAAGGATTTATGGTTTTTCAGGTATTACTAGCAAGAGAGAGTTGTCAATGTTTGAAATACGAATCATGTTGATGGATAAGGCTCGGATTGAAATTCGCAAGAAACTTAAAGAATGGAGATCTATGGCTGAAGCTAAGATTACAAATAAGGACAAAGGAAATAAGAGACAAAAGAGCACGTTTAGTGACAAAATAACTGGTCCAGAGAAGCATGGAGGTTCCAGTATTCATGGTAACAGGCATGTGGACAGTGATTCTATCCCAGTCACATCTGATGACACTGTAGAGGAGAACCAAGCTTTTACAATCAATGTTCCAGATTCTGATTTTCACAATTTTGACTTGGATAGAGCTGAAAATTCCTTTGAGGAGGACCAGGTCTGGGCTGCTTACGATGATGATGATGGAATGCCTAGATATTATGCTAGAATTCAGAAGGTGATCTCCTTGAAGCCATTTAGAATGCGTATTAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGATAGGTTCTGGTTTTTACAAAACTTGTGGGGATTTCAGGATTGGCAGGCATGAAATAACTGAATCATTAAATTCATTTTCACATAAGGTTAGGTGGACAAAAGGCACCAGAGGAGTCGTTCGCATCTTTCCTGGAAAGGGGCAAGTTTGGGCTCTCTATAGAAACTGGTCTCCTGACTGGGATGAAAATACTCCAGATGAAGTGATACACAAGTATGATATGGTGGAGGTGCTTGAAGATTTCAGCGAGGAGGAAGGTATATTAGTTACACCACTTGTTAAGGTTGATGGTTTTAGGACAGTGTATCAAAGGCACAGCCATGATCAGGTAAGGAAGATTCCTAAAGAGGAGATGTTTCGCTTCTCTCATCAGGTTCCTAATCACTTGCTTACAGGGCAAGAAGCTCATAATGCTCCAAAGGGCTGTCGAGACTTGGATCCAGCAGCTAACAACACAAGTTAA 2127 0.41 MECNKDEAARAKEIAERKFSEREYATAKKFALKALNLYPALEGLSQFLTTLDVYISAGNKISGEMDWYGILGVNPFADDETVRKQYRKLALTLHPDKNKSLGSEGAFKLVSEAWSLLSDKFRKLAYNQKRSLQGFQHNAPNHVGSQSEAPSSNGFKNINKNATSNVRTGNRSVRPPSTSIPTPHKKDGTFWTICNRCKTHYEYLRIYLNHSLLCPNCNEAFIAIEKCPPPNVVRSSNWSSPQHNQKSRHHAGWNNSSNPGRTCAVSQNSQSGGSSGMTYFNNTNFQGVPHSRMAGFVGTGGSSSVAGASFKQQSSEKRRECEGAASIAAWQRTQMYNRSDGSFSNVEKPMKKIRADDTHMSMRDGATSLGCFRELGKDDMGTERIYGFSGITSKRELSMFEIRIMLMDKARIEIRKKLKEWRSMAEAKITNKDKGNKRQKSTFSDKITGPEKHGGSSIHGNRHVDSDSIPVTSDDTVEENQAFTINVPDSDFHNFDLDRAENSFEEDQVWAAYDDDDGMPRYYARIQKVISLKPFRMRISWLNSRSNSELGPIDWIGSGFYKTCGDFRIGRHEITESLNSFSHKVRWTKGTRGVVRIFPGKGQVWALYRNWSPDWDENTPDEVIHKYDMVEVLEDFSEEEGILVTPLVKVDGFRTVYQRHSHDQVRKIPKEEMFRFSHQVPNHLLTGQEAHNAPKGCRDLDPAANNTS 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2022g00020 708 MobiDBLite consensus disorder prediction 431 447 - -
Gabi2022g00020 708 Pfam Domain of unknown function (DUF3444) 484 689 IPR024593 -
Gabi2022g00020 708 SUPERFAMILY Chaperone J-domain 62 145 IPR036869 -
Gabi2022g00020 708 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gabi2022g00020 708 PRINTS DnaJ domain signature 86 101 IPR001623 -
Gabi2022g00020 708 PRINTS DnaJ domain signature 68 86 IPR001623 -
Gabi2022g00020 708 MobiDBLite consensus disorder prediction 688 708 - -
Gabi2022g00020 708 Pfam DnaJ domain 66 127 IPR001623 -
Gabi2022g00020 708 MobiDBLite consensus disorder prediction 431 469 - -
Gabi2022g00020 708 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Gabi2022g00020 708 MobiDBLite consensus disorder prediction 235 270 - -
Gabi2022g00020 708 Gene3D DnaJ domain 63 173 IPR036869 -
Gabi2022g00020 708 SMART dnaj_3 65 122 IPR001623 -
Gabi2022g00020 708 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Gabi2022g00020 708 PANTHER BNAC03G44070D PROTEIN 1 704 - -
Gabi2022g00020 708 CDD DnaJ 66 119 IPR001623 -
Gabi2022g00020 708 MobiDBLite consensus disorder prediction 136 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2022g00020 Gabi-Chr2022 140751 150108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2022g00020 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.197 4.68e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2022g00020 - - gmx:100792212 1078.16