Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2022g00019 ATGATGATGGCCGGTTTGCCAGTGGAGGGTGGAAAAGGTGGAAGACTTAGCTGTGGGTATTCAAGTTTTAGGGGGAAGAGAGTGACAATGGAGGATTTTTATGATATTAAAACATTGAAGATAGGTGGTCAATCAATATGCTTATTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCAGAGTATTTGAAGGAACATCTCTTTGACAATCTCATTAAACATCCGAAGTTTTTGACAGATGCCAAATTGGCTATAAGTGAAACATATCAACAGACTGATGCTGATTTTCTGGATTCCGAAAAGGACAACTTCCGGGATGATGGCTCTACAGCTTCTACAGCGGTCTTGGTTGATAACCATCTTTATGTAGCTAATGTTGGAGATTCCAGGACTATAATATCGAAAGCTGGTAAAGCAATTGCTCTCTCTGACGATCATAAGCCAAATAGAAGCGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTGTTATGTGGGCAGGTACTTGGAGGGTAGGAGGGGTGCTAGCAATGTCTCGTGCCTTTGGTAATCGTATGTTGAAGCAGTTTGTTGTTGCGGAACCTGAGATCCAGGACCAAGAGATGGATGAACAAATTGAACTGCTTATTCTTGCAAGTGATGGACTCTGGGATGTTGTACAGAATGACGATGCTGTTTCTCTTGCCCGCGCAGAAGAGGAGCCCGAGGCAGCTGCTCGCAAGTTAACAGAGGCCGCATTTTCTCGTGGTAGTGCAGATAACATTACATGCATTGTGGTGCGCTTTCATCATGACAAACCAGACCCCGCTAATCCTGACAAAGCTGAATCAGCTACTGATCAGCATGAGCAGACAACGTGA 864 0.4444 MMMAGLPVEGGKGGRLSCGYSSFRGKRVTMEDFYDIKTLKIGGQSICLFGIFDGHGGSRAAEYLKEHLFDNLIKHPKFLTDAKLAISETYQQTDADFLDSEKDNFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSDDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQEMDEQIELLILASDGLWDVVQNDDAVSLARAEEEPEAAARKLTEAAFSRGSADNITCIVVRFHHDKPDPANPDKAESATDQHEQTT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2022g00019 287 Gene3D - 11 287 IPR036457 -
Gabi2022g00019 287 ProSiteProfiles PPM-type phosphatase domain profile. 17 263 IPR001932 -
Gabi2022g00019 287 FunFam Probable protein phosphatase 2C 76 10 269 - -
Gabi2022g00019 287 CDD PP2Cc 17 263 IPR001932 -
Gabi2022g00019 287 SMART PP2C_SIG_2 15 263 IPR001932 -
Gabi2022g00019 287 MobiDBLite consensus disorder prediction 265 287 - -
Gabi2022g00019 287 PANTHER PROTEIN PHOSPHATASE 17 263 IPR015655 GO:0004722|GO:0006470
Gabi2022g00019 287 ProSitePatterns PPM-type phosphatase domain signature. 48 56 IPR000222 GO:0043169
Gabi2022g00019 287 SMART PP2C_4 7 261 IPR001932 -
Gabi2022g00019 287 Pfam Protein phosphatase 2C 19 256 IPR001932 -
Gabi2022g00019 287 SUPERFAMILY PP2C-like 14 264 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2022g00019 Gabi-Chr2022 124648 133392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2022g00019 14 267 PP2C-type Phosphatase Gene Family AT5G53140 83.465 6.11e-162 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2022g00019 K17506 - gmx:100805795 503.827