Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2022g00011 ATGAAGAACTCAAAACGCCACTCGCCGCAGGCCGCAGCTCAGCGACGAGTAGCTTCTGATTCCGTCGAGACCATAACGAGACTCAAGAATGCTCGCCGGAGAAGGCTCGAATTCCGTCGAATGAAGTATACTTGCCAGGCGAGGATCCACGTCGGAAATGGCTCCGCCGGCGGAACTCATCCACCGGAGGCGACAAAGGTCGTCGATTGGGAGAATGAGAAAAGAGAGATTCACGAGTCCGTGGAGATATCGCTGTCGTTGGCGATGTCTTCGCCGTCATCGGAGGAGGAGGATCGGTCATCTGCCCGAAACGACGCGGTGTTATCGTACGGTTCAGTGTCGATGATGGGGAGCAGGAAGGAGATGGAGGATGCGGTGAGCGTGGAGATAGGGTTTGCGGCGAAGGATAGAGCGAAGTGTGACTTCTTCGCGGTTTACGACGGTCACGGCGGAGCTCAGGTGGCGAAGGCGTGCCGGGAGCGGTTGCACCGGATGGTGGCGGAGGAGGTGGAGAGGTGCGGGGTAAGGAGTGGGAATGAGGTGAAATGGGACTGGGAGGGAGTGATGGAAGGGTGTTTTGTTAAAATGGACAGAGAGGTAGCGGATTATGCGGCGGCGAAGACGGTGGGTTCCACGGCGGTTGTGGCCGTTGTGACGATGGAAGAGGTGGTCGTGGCTAATTGCGGTGATTGTCGGGCGGTGATGGGAAGAGGAGGTGAGGCCGTGAACTTGTCTAATGATCATAAGCCCGACAGGCCTGATGAGTTGATGCGAATCGAAGAGGCTGGTGGAAGGGTCATAAACTGGAATGGCCATCGCGTTCTGGGTGTTCTTTCCACTTCGCGTTCTATAGGAGATCACTACCTTCGACCGTATGTAATATCGAAACCAGAAGTCACAGTGACCAAGCGAACCAGCAAGGATGAATTTCTTATCCTAGCAAGTGATGGTTTGTGGGATGTAATATCAAGTGAAGCTGCGTGCCAGGTTGTAAGGAAATGCCTCAACGGCCAGATTAGGAGAGTTTGCCACGGGGTTGGGAATCAAACCCGTGCTGCGGAGGCTGCAGCCCTCTTGGCAGAGATAGCATTGGCAAAGGGAAGCAGAGATAACACCAGTGTCATTGTAGTCGAGCTAAGAGGAACAACAACATCTAGTTGA 1161 0.5444 MKNSKRHSPQAAAQRRVASDSVETITRLKNARRRRLEFRRMKYTCQARIHVGNGSAGGTHPPEATKVVDWENEKREIHESVEISLSLAMSSPSSEEEDRSSARNDAVLSYGSVSMMGSRKEMEDAVSVEIGFAAKDRAKCDFFAVYDGHGGAQVAKACRERLHRMVAEEVERCGVRSGNEVKWDWEGVMEGCFVKMDREVADYAAAKTVGSTAVVAVVTMEEVVVANCGDCRAVMGRGGEAVNLSNDHKPDRPDELMRIEEAGGRVINWNGHRVLGVLSTSRSIGDHYLRPYVISKPEVTVTKRTSKDEFLILASDGLWDVISSEAACQVVRKCLNGQIRRVCHGVGNQTRAAEAAALLAEIALAKGSRDNTSVIVVELRGTTTSS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2022g00011 386 Pfam Protein phosphatase 2C 110 372 IPR001932 -
Gabi2022g00011 386 SMART PP2C_4 99 377 IPR001932 -
Gabi2022g00011 386 Gene3D - 102 384 IPR036457 -
Gabi2022g00011 386 MobiDBLite consensus disorder prediction 1 20 - -
Gabi2022g00011 386 FunFam Protein phosphatase 2C 51 102 386 - -
Gabi2022g00011 386 ProSiteProfiles PPM-type phosphatase domain profile. 109 379 IPR001932 -
Gabi2022g00011 386 PANTHER PROTEIN PHOSPHATASE 93 379 IPR015655 GO:0004722|GO:0006470
Gabi2022g00011 386 ProSitePatterns PPM-type phosphatase domain signature. 142 150 IPR000222 GO:0043169
Gabi2022g00011 386 SUPERFAMILY PP2C-like 103 381 IPR036457 -
Gabi2022g00011 386 CDD PP2Cc 109 379 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2022g00011 Gabi-Chr2022 90219 93922 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2022g00011 69 380 PP2C-type Phosphatase Gene Family AT2G29380 48.071 3.10e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2022g00011 K14497 - gmx:100807235 511.916