Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2022g00001 ATGGCCGCTTCCGTCGACAACCGCCCATACACTCCTCTCCAACACGACGTCGTTCGCACCTTCAATCTACCCAATAAGTCACCCGAACCGTCCTTCGTATCAGATTCCTCAAGCGAAGACGACGATAACGTCATTATTGCCAACTTAAAAGACATGATTCGAGAGGGAACCATGGAAGTGGAACCCTCCATCTTCGACCCACGAGATGATGGAACCTCCGACCAATGGATCCAACGGAACACTTCCCTGGTCCGTCTCACAGGTAAGCATCCCTTCAACTCCGAACCACCACTCCCAAGCCTCATGCGCCATGGCTTCATCACCCCCGTTCCACTCCACTACGTCCGTAACCACGGACTCGTTCCCAGAGCACGTTGGGAGGACTGGACCGTCGAGGTATCCGGCCTAGTGAACCGTCCCTCCCGGTTCACCATGGACCAGCTGGTTCACGATTTCCGAAACCGCGAGTTCCCCGTTACCCTTGTCTGCGCTGGGAACCGCCGCAAGGAACAGAACATGGTGAAGCAGAGCATCGGGTTCAATTGGGGCGCTGCTGCCATCTCCACTTCGGTGTGGCGTGGTGTACCGTTGAGGAGCGTGCTCAAGCGGTGTGGGATCTTTACTCGCTCAAAGGGAGCCCTCCACGTGTGCTTCGAAGGAGACGAGGATCTGCCAGGTGGAGGTGGGTCCAAGTATGGAACCAGTATCCTGAGGGAGATTGCACTGGATCCCTCCCGCGACATCATCTTAGCTTTCATGCAAAACGGTGAGCATTTGGCCCCAGATCACGGCTTCCCCGTACGGTTGATAATACCGGGTTTCATTGGTGGCCGCATGGTGAAATGGTTGAAACGCATCGTTGTAACTACCCAGCAATCTGACAGTTTTTACCATTACAAGGATAACAGAGTACTCCCCTCCCACGTTGACGCCGAGCTTGCCAATGCCGAAGGTTGGTGGTACAAGCCAGAGTATATTATCAACGATCTTAACATAAACTCGGTAATAACCACTCCCTGCCACGATGAGATCTTGCCCATCAACTCATGGACTACTCAGACACCTTATGTACTCAGAGGTTACGCATATTCCGGGGCTGGGAGAAAGGTGACACGTGTTGAGGTGACACTGGACGGTGGTGATACGTGGCAAGTATGCGCGTTAGACCATCCGGAGAAACCCAACAAATACGGTAAATACTGGTGCTGGTGCTTCTGGTTCTTGGAGTTGGAGATATTGGACCTGCTTGGGGCCAAGGAGATTGCGGTGCGCGCTTGGGACGACGCCCTCAACACCCAGCCCGAGAAGCTCATTTGGAATGTTATGGGCATGATGAACAACTGTTGGTTCAGAGTGAAAACGAACGTGTGCAAGCCCCATAAGGGTGAGATTGGCATAGTGTTCGAGCACCCAACCCAACCTGGCAACCAATCTGGAGGTTGGATGGCAAAAGAAAAACACCTCGAGAAATCATCAGTTTCTAACACAACCCTCAAGAAGAGTGTCTCCTCGCCGTTCATGAACACAACCTCAAAAATGTACACCATCTCTGAAGTCAAAAAGCACAGCAACCCCGATTCAGGTTGGATCATCGTAAACGGCCACGTGTACGATTGCACCCGCTTCCTTAAAGACCATCCCGGCGGCACCGACAGCATCCTCATCAACGCCGGCACCGATTGCACGGAGGAGTTCGAAGCCATCCACTCCGACAAAGCCAAGAAAATGCTCGAGGATTACCGAATCGGCGAGCTCGTGACCAGCGTCGACACCTCTGATTCGTCGGCGAATAACTCCATGCATGGCAATTCCGAAACCACTCATTTGGCCCCCATCGAGGAAGTTACACCACTAGGTAGCATGGCTCTTAACCCACGTGAGAAAATCCCATGCAAGCTCGTGTCCAAAACGACGATCTCCCACGACGTTAGGCTCTTCCGTTTTGCATTACCCTCAGAGGAGCAACTCATGGGTTTGCCAGTAGGGAAGCACATATTCTTATGTGCAAGCATTGACAAGAAGCTTTGCATGCGAGCTTACACTCCAACGAGCGGCGTCGATGAAGTGGGTTACTTCGATCTAGTGGTCAAGATTTACTTCAAAGGTGTGCACCCAAAGTTCCCAAATGGTGGGGTCATGTCTCAACACTTGGACTCGCTTCCTATTGGCTCTGTCTTGGACGTGAAGGGTCCACTAGGCCACATAGAGTACACTGGTAAAGGCAACTTTCTTGTTCACGGGAAACGCAAGTTTGCAAAGAGGCTAGCTATGTTGGCTGGTGGGACTGGGATCACACCCATTTACCAAGTGGTCCAAGCCATTCTTAAGGATCCAGAGGACCCCACTGAAATGCATGTGGTGTACGCGAACCGGACCGAGGATGATATTTTGCTGAGGGAAGAGCTCGATGCGTGGGCTAAGAAGCATGACCGGTTCAAGGTATGGTACGTGGTACAAGAAAGCATAAGAGAAGGGTGGGAATACAGCGTGGGGTTCGTAACGGAAAGTATCCTCAAAGAGCATGTTCCACGGGCATCTCAGGATACTTTGGCTTTGACATGTGGACCACCTCCCATGATTCAGTTTGCAGTGCAGCCGAATTTGGAGAAGTTGGGCTATGACATCAAGAACAACTTGGTCGTGTTTTAG 2649 0.5191 MAASVDNRPYTPLQHDVVRTFNLPNKSPEPSFVSDSSSEDDDNVIIANLKDMIREGTMEVEPSIFDPRDDGTSDQWIQRNTSLVRLTGKHPFNSEPPLPSLMRHGFITPVPLHYVRNHGLVPRARWEDWTVEVSGLVNRPSRFTMDQLVHDFRNREFPVTLVCAGNRRKEQNMVKQSIGFNWGAAAISTSVWRGVPLRSVLKRCGIFTRSKGALHVCFEGDEDLPGGGGSKYGTSILREIALDPSRDIILAFMQNGEHLAPDHGFPVRLIIPGFIGGRMVKWLKRIVVTTQQSDSFYHYKDNRVLPSHVDAELANAEGWWYKPEYIINDLNINSVITTPCHDEILPINSWTTQTPYVLRGYAYSGAGRKVTRVEVTLDGGDTWQVCALDHPEKPNKYGKYWCWCFWFLELEILDLLGAKEIAVRAWDDALNTQPEKLIWNVMGMMNNCWFRVKTNVCKPHKGEIGIVFEHPTQPGNQSGGWMAKEKHLEKSSVSNTTLKKSVSSPFMNTTSKMYTISEVKKHSNPDSGWIIVNGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFEAIHSDKAKKMLEDYRIGELVTSVDTSDSSANNSMHGNSETTHLAPIEEVTPLGSMALNPREKIPCKLVSKTTISHDVRLFRFALPSEEQLMGLPVGKHIFLCASIDKKLCMRAYTPTSGVDEVGYFDLVVKIYFKGVHPKFPNGGVMSQHLDSLPIGSVLDVKGPLGHIEYTGKGNFLVHGKRKFAKRLAMLAGGTGITPIYQVVQAILKDPEDPTEMHVVYANRTEDDILLREELDAWAKKHDRFKVWYVVQESIREGWEYSVGFVTESILKEHVPRASQDTLALTCGPPPMIQFAVQPNLEKLGYDIKNNLVVF 882
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi2022g00001 882 FunFam Nitrate reductase 70 319 - -
Gabi2022g00001 882 CDD cyt_b5_reduct_like 631 882 - -
Gabi2022g00001 882 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 511 586 IPR001199 -
Gabi2022g00001 882 FunFam Nitrate reductase [NADH] 733 882 - -
Gabi2022g00001 882 CDD eukary_NR_Moco 69 454 - -
Gabi2022g00001 882 Gene3D - 329 505 - -
Gabi2022g00001 882 Pfam Mo-co oxidoreductase dimerisation domain 325 456 IPR005066 GO:0016491|GO:0030151
Gabi2022g00001 882 SUPERFAMILY E set domains 329 456 IPR014756 -
Gabi2022g00001 882 Gene3D Translation factors 619 732 - -
Gabi2022g00001 882 Pfam Oxidoreductase NAD-binding domain 757 864 IPR001433 GO:0016491
Gabi2022g00001 882 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 67 327 IPR036374 -
Gabi2022g00001 882 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 794 805 IPR001709 GO:0016491
Gabi2022g00001 882 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 545 555 IPR001709 GO:0016491
Gabi2022g00001 882 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 782 791 IPR001709 GO:0016491
Gabi2022g00001 882 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 678 685 IPR001709 GO:0016491
Gabi2022g00001 882 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 756 775 IPR001709 GO:0016491
Gabi2022g00001 882 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 826 842 IPR001709 GO:0016491
Gabi2022g00001 882 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 850 858 IPR001709 GO:0016491
Gabi2022g00001 882 PRINTS Cytochrome B5 reductase signature 678 685 - -
Gabi2022g00001 882 PRINTS Cytochrome B5 reductase signature 723 737 - -
Gabi2022g00001 882 PRINTS Cytochrome B5 reductase signature 756 775 - -
Gabi2022g00001 882 PRINTS Cytochrome B5 reductase signature 850 858 - -
Gabi2022g00001 882 PRINTS Cytochrome B5 reductase signature 657 668 - -
Gabi2022g00001 882 PRINTS Cytochrome B5 reductase signature 794 805 - -
Gabi2022g00001 882 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 626 738 IPR017927 GO:0016491
Gabi2022g00001 882 MobiDBLite consensus disorder prediction 21 40 - -
Gabi2022g00001 882 PIRSF Nitr_rd_NADH 5 881 IPR012137 GO:0006809|GO:0042128|GO:0050464
Gabi2022g00001 882 FunFam Sulfite oxidase, mitochondrial 509 590 - -
Gabi2022g00001 882 Gene3D - 733 882 IPR039261 -
Gabi2022g00001 882 SMART Cyt_b5_2 514 586 IPR001199 -
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 260 273 IPR008335 GO:0016491
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 327 339 IPR008335 GO:0016491
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 399 409 IPR008335 GO:0016491
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 106 122 IPR008335 GO:0016491
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 437 450 IPR008335 GO:0016491
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 185 200 IPR008335 GO:0016491
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 243 259 IPR008335 GO:0016491
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 372 384 IPR008335 GO:0016491
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 276 289 IPR008335 GO:0016491
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 358 372 IPR008335 GO:0016491
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 84 98 IPR008335 GO:0016491
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 424 436 IPR008335 GO:0016491
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 170 182 IPR008335 GO:0016491
Gabi2022g00001 882 PRINTS Eukaryotic molybdopterin domain signature 159 170 IPR008335 GO:0016491
Gabi2022g00001 882 PANTHER SULFITE REDUCTASE 66 459 - -
Gabi2022g00001 882 SUPERFAMILY Riboflavin synthase domain-like 622 739 IPR017938 -
Gabi2022g00001 882 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 725 877 IPR039261 -
Gabi2022g00001 882 Gene3D - 68 318 IPR036374 -
Gabi2022g00001 882 FunFam NADH-cytochrome b5 reductase 618 732 - -
Gabi2022g00001 882 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 542 549 IPR018506 GO:0020037
Gabi2022g00001 882 PRINTS Cytochrome B5 signature 573 585 IPR001199 -
Gabi2022g00001 882 PRINTS Cytochrome B5 signature 546 560 IPR001199 -
Gabi2022g00001 882 PRINTS Cytochrome B5 signature 536 546 IPR001199 -
Gabi2022g00001 882 PRINTS Cytochrome B5 signature 561 568 IPR001199 -
Gabi2022g00001 882 Pfam Oxidoreductase FAD-binding domain 631 737 IPR008333 -
Gabi2022g00001 882 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 135 170 IPR022407 GO:0043546
Gabi2022g00001 882 Gene3D - 507 589 IPR036400 -
Gabi2022g00001 882 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 509 587 IPR036400 -
Gabi2022g00001 882 Pfam Cytochrome b5-like Heme/Steroid binding domain 516 585 IPR001199 -
Gabi2022g00001 882 Pfam Oxidoreductase molybdopterin binding domain 118 297 IPR000572 -
Gabi2022g00001 882 FunFam Nitrate reductase 329 505 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi2022g00001 Gabi-Chr2022 17429 22650 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2022g00001 621 873 NADPH P450 reductases AT5G17770 40.625 4.00e-50 176
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2022g00001 K10534 - gmx:732634 1560.04