Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2017g00022 ATGCATCCTTCCTTGTATGATGATGGTCACCAAGGCCTAACCTACAATCTTAGAAAGAGGTTGAAACGTGACAAGAGGCATTTAGTTGGAAAATCTTCAACTAATGGAGTCTCTTCAGGAACACAGAGAGGTTTGGAGAGAATCCAAAGTCCTCATACTGAAGTTAGTGCTGTGAAAAAGTCACTTGATTCATGTACTGCACGCTCAAGTCTTGATAGAAGTGCCAAAGTGCCTATCCCTTTGGGGCCAGCCCACCAAGCTGAAGTGCCACAATGGACTGGCATGACTTATGAGAGTGATTCTAAGTGGTTGGGGACACAAATATGGCCAACAGAAAATGTAAATTCCAAACGTTTTTTTGAAAGGCAACGGCAACCCATTGGAAAGGGAAGAGGAGATTCATGTGGCTGCCAAGTACAAGGTTCTGTTGAGTGTGTGCGGTTCCACATTGTTCATAAAAGGACTAAACTGAAGTTGGAATTGGGTGAGGCTTTTTACAAGTGGAATTTACATAAGGTAGGTGAAGAAGTTAGGCGTTTGTGGACACGGGAAGAAGAGAAGAAGTTCAAAGATGTGGTGAAATCAAACCCTCCTTCACTTGAAAGATGTTTCTGGGATCATATTTTTAAAGCATTTCCCATGAAGAGCAGGGAAGATTTAGTTAGCTACTACTTCAATGTCTTTATTTTGCAGCGCAGAGGATACCAGAATAGGCATACTCTAAATGACATTGACAGTGATGATGATGGATCGGAATTTGGACCATCGAGGAAGGTTTTTGGACATAAATCACGTAGCTCCACCTTATTGCCCCCCAAAAGCCAGAGACAGAGGGAAGATAGAAAGTGA 849 0.4252 MHPSLYDDGHQGLTYNLRKRLKRDKRHLVGKSSTNGVSSGTQRGLERIQSPHTEVSAVKKSLDSCTARSSLDRSAKVPIPLGPAHQAEVPQWTGMTYESDSKWLGTQIWPTENVNSKRFFERQRQPIGKGRGDSCGCQVQGSVECVRFHIVHKRTKLKLELGEAFYKWNLHKVGEEVRRLWTREEEKKFKDVVKSNPPSLERCFWDHIFKAFPMKSREDLVSYYFNVFILQRRGYQNRHTLNDIDSDDDGSEFGPSRKVFGHKSRSSTLLPPKSQRQREDRK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2017g00022 282 MobiDBLite consensus disorder prediction 241 259 - -
Gabi2017g00022 282 SMART ELM2_2 79 132 IPR000949 -
Gabi2017g00022 282 MobiDBLite consensus disorder prediction 31 61 - -
Gabi2017g00022 282 Pfam Myb-like DNA-binding domain 180 227 IPR001005 -
Gabi2017g00022 282 MobiDBLite consensus disorder prediction 24 61 - -
Gabi2017g00022 282 SMART sant 177 230 IPR001005 -
Gabi2017g00022 282 CDD SANT 181 228 IPR001005 -
Gabi2017g00022 282 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 272 - -
Gabi2017g00022 282 MobiDBLite consensus disorder prediction 241 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2017g00022 Gabi-Chr2017 275165 276013 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi2017g00022 Myb_DNA-binding 7.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2017g00022 - - gmx:100780550 372.474