Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2017g00012 ATGGATAAAGAGGAAGCCACACAAGTCCCCAGAAGAACAACCAGGTCTTCAGCTTCATATTCAGCATCCACTTCAAATAATGTACCTGCAGCAAAAGTAAATAGCCTTGAACCTCTAACAATTAATGATCTTTTAGTTGGAGGAGACCCCTTTAGCCTAGATGATATAATTTGTAGTTTTCCCGGTAGAAATAGCCAGATTCTAGAGATTGTGCGGCTTTTGGGACCTTTGAATTCGCCAATACTTCCTTTGTTTGTGTATGGAGGTGCTTCCACTGGAAAAACCAGTATCATTCTTCAATTATTCAGGCATCTCAACAGGCCTCTTGTTTACTCTAGTTGTAGGACGTGTTATAATCAGCGTATCTTGTTTGAATCTATTATAAATCAATTACTTCTCCATAGGAAAAATGGTGCCAATGGTTATTTGAGTGCAAAGCGCTGTGAAAGACCATCTGATTTTGTCAATTTTCTTCGGGAAGCATTGACCAATGTTATAAACAATCTCAAGGAGAAGTCAAATAAGATGGTTCAAAGGGGAATTGGAAATATGATCTACTTGGTGTTTGACAATTTTCAGCTTGTTAGGGAGTGGGATAAGAGCTCTACTATATTGCCCTTACTGTTTAATCTCCATGATCTGCTAAAGATGCCTGAGGTGGGTGTGATTTTCATCAGCAGTACTTCCCCAGATACCTTTTACTCTAACATGGGTTATGTGGAGCCTATCCCCATTTACTTTCCTGATTACACAGAAGGTGATATTCGTCAAATATTGTTGAGAAACCAAGCAAACCAGAAGCTATATTCCTCATTTCTGGATGTAGCTCTGAGGCCTTTTTGTAGAATTACTAGGCAGGTTGATGAATTATCTACTGCCTTCAGGCCACTATATGAAAAATATTGTGAACCTTTAAGTGATAAGGGAGTTGTTCCTGGTGAAGACATGAAGCGAAGATTATTCAGTCACATCAAGCCTCGTATTGCCTCCGCTATGAATGAGATATTTAAGGTTTCATCTCTTCCTTCAACTGAAGTTGAGACCTGTAAAGAGACAAAGCGGAAGGGGATTCCCAAGAAATTGGAACAATCTGAAGAAATTGGCGAGCTAGATTTTCATATGTCTACTAGTGCAAAGTATCTTCTTATTTCAGCTTTTCTTGCCTCCAGAAATCCAGCTACTCTTGATGCTTCACTTTTTGACTCCAAAGGTGGTTCTGACAACCGAAAACGAAAGAGGAAGGCCTCTGCGAAAGAGCTGGAAAAGAAGGAAAGTTTAGAAGAGGAACTACTAATGAAAGGACCTGGAACTTTCCCATTGGAGAGGTTGTTAGCCATCTTTCAATGTCTTGTATCAGTTGCAGAAGAGCCCTCTGATGAGGAAGAACAAAACAATGATGGATTAGGATTTCAAGGTGGCAACGGTGGACTGATGTCCGGTGTTCTTTTTCAGTTATCCAGTCTCTGCAATGCTAATTTTATATTCAAAGGAAGAAGCTGTCCATTAGAAGGCTCAACTCGGTATCGATCAACTATATCTGAAGACTTGGTTTTGAAGGTTGCAAGGAGCCTTAAGTTCCCGTTATCAAAGTATTTGTATAGAGGTTAG 1608 0.398 MDKEEATQVPRRTTRSSASYSASTSNNVPAAKVNSLEPLTINDLLVGGDPFSLDDIICSFPGRNSQILEIVRLLGPLNSPILPLFVYGGASTGKTSIILQLFRHLNRPLVYSSCRTCYNQRILFESIINQLLLHRKNGANGYLSAKRCERPSDFVNFLREALTNVINNLKEKSNKMVQRGIGNMIYLVFDNFQLVREWDKSSTILPLLFNLHDLLKMPEVGVIFISSTSPDTFYSNMGYVEPIPIYFPDYTEGDIRQILLRNQANQKLYSSFLDVALRPFCRITRQVDELSTAFRPLYEKYCEPLSDKGVVPGEDMKRRLFSHIKPRIASAMNEIFKVSSLPSTEVETCKETKRKGIPKKLEQSEEIGELDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKASAKELEKKESLEEELLMKGPGTFPLERLLAIFQCLVSVAEEPSDEEEQNNDGLGFQGGNGGLMSGVLFQLSSLCNANFIFKGRSCPLEGSTRYRSTISEDLVLKVARSLKFPLSKYLYRG 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2017g00012 535 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 245 532 IPR047088 -
Gabi2017g00012 535 MobiDBLite consensus disorder prediction 11 25 - -
Gabi2017g00012 535 MobiDBLite consensus disorder prediction 403 419 - -
Gabi2017g00012 535 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 317 IPR027417 -
Gabi2017g00012 535 Coils Coil 155 179 - -
Gabi2017g00012 535 Coils Coil 409 429 - -
Gabi2017g00012 535 FunFam Origin of replication complex subunit 5 60 236 - -
Gabi2017g00012 535 Gene3D - 60 236 IPR027417 -
Gabi2017g00012 535 MobiDBLite consensus disorder prediction 398 419 - -
Gabi2017g00012 535 MobiDBLite consensus disorder prediction 1 25 - -
Gabi2017g00012 535 Pfam AAA ATPase domain 60 214 IPR041664 -
Gabi2017g00012 535 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 53 534 IPR020796 GO:0000808|GO:0005634|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2017g00012 3 534 Core DNA Replication Machinery Family AT4G29910 60.037 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2017g00012 K02607 - gmx:100784340 841.262