Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2017g00004 ATGGGAAAGAGGTCTCAAAGATTCCCTACGCAGTATGAGAAAGATCAGTCAGGTTGTATGTGGGGTTTTATTAGTATGTTTGATTTTCGCCATGGTCGCTTTACTCGGAAGTTGATTGCAGATAAGAGGCACAGCAGCAAGCATGCTGTTGGTGCTGTACTTACTAAGAACAAGTTTGAGATGTTGAGTAATTTGGATGAAGAATATCAAGGCGATTTTGACAGAGGAGAGTATAAGAGACTAACAGTGACAACTGATGCTGATAAGCTTAGTGTGAAGAAACTTATAGAAGAAGAGATGTGCAATGACCAGGATGAAATAAAGGATCAAGGTAATGCTGAAGTAGAATCAAAGCAATCCAGATTAGGGGGTGAAGACCCCCGGAAGACAGATTCCAAAAGAAAAAAAAAATCTCGCAAGAAAAGCCGGGATATGGACACCTGTGATTTGAATTTGGATGCAACCTTGAAATCTGAATTCTCAAATAATCAGCATTCAAGGCAACAGTCAAAAGATACTCTTAATTTGGACAAGATAATGGAAGATTTTTGTCATATGAAAGGTGCTTGTTCTATGATACCTGACAATGATGGCAAAGTTTATGCAGAATCAAACCAAAAGCACACTATTTCTGAAAACCTTGCAAGAGATGCAATCCATGAATTTGTGAATCAGATGATATTAAATGGGAAAGATCCGGCAGAGAATAGAAAATTCCTTTGCTCACATGAACTCATGGAAGCACTTCAGGTTATAAGCTCAGATAAGGAATTGTTTCTTAGACTTCTACAAGACCCAAATTCACACTTATTGAAATATATTCAGGAGTTGGAGAATGTTCAGGGGACATGTGACAAAGAATATGGTTCAGTTACTGGCTCCAACTTCTCTGAACAAGACCCTGGCAATCTGAAACAAACTAGGGAGATTGTCAACCGCAAGCATCTTAACTTTTTCAGGAAAAAGGTAAAGTCTCAATCAAAATGTCCAACAAATGAAAATGGGAAAACTGAGTTTTCAAATAGAATTGTCATTCTGAAACCTGTGCTAACGAGCATGCAAAATTCTGAAAGTGAAAACAAGTTTGCCTCATCGCCAGATTCTCATGATATTGTCCATTATAAAGGTCCTTCTGTGAAAGCTAGTTCGCATTTTTCTCTTACAGAGATAAAAAGGAAATTAAAACATGCTATGGGAAAGGAGAGACATGGAAATCCTGATGGGATCTCAAGAAAACTCTTGGCTGAACTGAAAAATAAGGGGCCAGTAGGCAAAGCCATTGGTAAAGATAATTTTGGAATGCGATCTCCTAATAAAGACCATTTCTTCATTGAAAAAATTGCAAGACCTATGTCTGATGTTATGAAAGGAAACAAGACTGGTACATTGAAAGAATCTGAATTGAATGTGGAACATGAAAGTGGTACTCCCAAACAAAGGGTTTCTAACATATATATTGAGGCTAAGAAACATCTGTGTGAGATGATAGATAATGGAGATGAGAACCCGGACATTTCAAGCAGGCAGATTCCAAAATCCCTTGGGAGGATACTATCTCTTCCTGAGTACAACTTCTCTCCTCTTGGAAGTCCTGGAAGGGATTTGGAGCATAATTTTGTGACTGCTCAGGCAAGACTTTCTACTTCAGATAAAACTTGGGAGGTTAATGAGGATAATTTGTCTCCCAAACAAGCAACTTTTATTGGTCATCCAGATCAGGAAACAAACAATTCAGCGAAGCAGACTAGCATTTGTGATGAAAGCTCTAATAATAAAGTACAAGAAATCAAGTCAGAATCTAATTTCTCACATGATCTTGGTCATGTGGATACAGCAGAAGCCTGTAATTCAGTTGGAGATGAGATAGTTACTGAAGATAGTGTAGAATTTACTAAAGAGATTAGTGTTTTGGAATCATCCCCGGATCCCAATGGCTTCATCACTGGAAAGGACCAAAATCATGATATCTCAGAAATTCCTGATGGTGCAAGATGTTCTGAAGGTTTGAATCCGGACATAACAGAAGAGAACCAACCATCATCTATACTTTCACCCCCTTCTCACTCTTCCTTCACTAAGAAAATTGAAGAGCTAGAAAGTCATACCAATGTATCTGGGCGACCAAGTCCGGTTTCTGTTCTCGATACATCATTCTCAGACGATGACTTCAGCCCTGAGTACTCCAGATGTAAACCTGTACAATCACTGCAAATTCAATTTGAAGAATACGACTTGTCGCCTGTGGATCAATTTGATAGAGGAAACCATTGTCTCGAAGAAAATGGATTGATATATGACTACATTAAAGCTGTCTTGCATGCCTCTGGCTTGACTGGAGATCAATTGTTGATGAAATGCCTTTCCTCAGACAAGATACTAGATCCTTCCTTGTTTGATCAGGTAGAGTACTTCTCTAACCTGCTTTGCCATGATCAGAAGCTCCTATTCGACTGTATCAACGAAATTCTCATGGAGGTTTGTTGGCATTACTTTGGGGTCTCACCTTGGGTATCATTTGTAAATCCTAGCATAAGGCCAACTCCAAATATGAAAAAGGTTATTCTCAAGGTTTGGGAAGGAGTGTGCTGGCATGTCCTTCCCTTGCCCCCACCACATGCTTTGGAGCAAATTGTTAGGAAAGACATGGCAAGAAGTGGAACATGGATGGACCTTCGACTTGATGCTGAAACAATTGGTTTTGAAATGGGGGAGTCCATTCTTGCAGAACTGATGGAAGATACAATATTGAGCCTTGCAAGTGACAGCCCAGAAAGTAATTGTTCTGTGCTTCAATGTGAACTGAAGGACAGTGAGAGCAACATCAACTTGTAA 2832 0.393 MGKRSQRFPTQYEKDQSGCMWGFISMFDFRHGRFTRKLIADKRHSSKHAVGAVLTKNKFEMLSNLDEEYQGDFDRGEYKRLTVTTDADKLSVKKLIEEEMCNDQDEIKDQGNAEVESKQSRLGGEDPRKTDSKRKKKSRKKSRDMDTCDLNLDATLKSEFSNNQHSRQQSKDTLNLDKIMEDFCHMKGACSMIPDNDGKVYAESNQKHTISENLARDAIHEFVNQMILNGKDPAENRKFLCSHELMEALQVISSDKELFLRLLQDPNSHLLKYIQELENVQGTCDKEYGSVTGSNFSEQDPGNLKQTREIVNRKHLNFFRKKVKSQSKCPTNENGKTEFSNRIVILKPVLTSMQNSESENKFASSPDSHDIVHYKGPSVKASSHFSLTEIKRKLKHAMGKERHGNPDGISRKLLAELKNKGPVGKAIGKDNFGMRSPNKDHFFIEKIARPMSDVMKGNKTGTLKESELNVEHESGTPKQRVSNIYIEAKKHLCEMIDNGDENPDISSRQIPKSLGRILSLPEYNFSPLGSPGRDLEHNFVTAQARLSTSDKTWEVNEDNLSPKQATFIGHPDQETNNSAKQTSICDESSNNKVQEIKSESNFSHDLGHVDTAEACNSVGDEIVTEDSVEFTKEISVLESSPDPNGFITGKDQNHDISEIPDGARCSEGLNPDITEENQPSSILSPPSHSSFTKKIEELESHTNVSGRPSPVSVLDTSFSDDDFSPEYSRCKPVQSLQIQFEEYDLSPVDQFDRGNHCLEENGLIYDYIKAVLHASGLTGDQLLMKCLSSDKILDPSLFDQVEYFSNLLCHDQKLLFDCINEILMEVCWHYFGVSPWVSFVNPSIRPTPNMKKVILKVWEGVCWHVLPLPPPHALEQIVRKDMARSGTWMDLRLDAETIGFEMGESILAELMEDTILSLASDSPESNCSVLQCELKDSESNINL 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2017g00004 943 MobiDBLite consensus disorder prediction 563 583 - -
Gabi2017g00004 943 MobiDBLite consensus disorder prediction 103 132 - -
Gabi2017g00004 943 MobiDBLite consensus disorder prediction 103 148 - -
Gabi2017g00004 943 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 918 - -
Gabi2017g00004 943 Pfam Protein of unknown function (DUF3741) 224 268 IPR022212 -
Gabi2017g00004 943 Pfam Domain of unknown function (DUF4378) 766 913 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2017g00004 Gabi-Chr2017 90450 96041 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2017g00004 1 901 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 35.281 1.28e-121 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2017g00004 - - gmx:100783243 1388.24