Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2012g00017 ATGAAAAGCCTATGTTCTGCGATGTTCTTTCATGCCAGTGCCCCAGTTCGCAGCAGAGCCTTTTCAGACCATTTAACTAGAAAGAGCTTTGGAAAGCAACTTTACTTCCACTCCCGTTGCCTTGTTTTCTCTTCATACTCAGGTTCTGCATCTCTATCAGTAATGGAAGAAGTTGAAGAGAAGCCTATATTTGATGGAGAGAAGGCTGATTTGCTTGTTAAGGAGCTTAGAAAGAACTTTGATTCAGGCAAGACAAAAAGCTATAAATGGAGGATTTCCCAGTTAGAGGGCATAGCTAAGATGCTAGAAGAGAGGGAGAAGGACATTATTACCGCAGTATATAAGGACCTTTCTAAACCAGGATTCGAAGCATTTATATCTGAGGTGTCTCAGACAAGATCCTCATGTAGTGAAGCACTTAAAGAACTGAATCACTGGATGAAGCCTGAAAAGGTAAAGACTTCAATTACAACATATCCATCAACAGCAGAGATTGTGTCAGAACCACTGGGAGTTGTGTTGGTCATCTCAACATGGAACTTTCCTTTCTTGTTATCACTTGATCCGGTCATTGGTGCAATTTCAGCGGGCAATGCAGTGGTTCTGAAACCATCAGAAATTGCTCCAGCAACATCATCACTGCTTGCAAATTTGCTCAAAGATTATGTAGACAACTCTGCAATAAGAGTTATTGAAGGGGCTGTTCCTGAAACAACTGCACTCTTGGAGCAGAAGTGGGATAAGATACTATACACTGGTAGTGCTAGAGTAGGCCGCATTGTCATGGCTGCTGCTGCAAAGCACCTCACCCCAGTAATTCTGGAACTTGGAGGAAAGTGCCCAGCTGTTGTTGATTCAAATGTCAACTTAAAAGTTACTGCTAGGAGGATAGTAGCTGGAAAGTGGGCTACCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAAAAAGGAATTTGCTCCAACACTTATAAATGCTCTGAAAGAGGAATTGGAGCAATTTTTTGGGAACGATCCAATGGAATCAAAAGACATGTCACGTATTGTGTCTCCAACCCAATTTGCACGGCTTGTGAAGCTCTTGGATGAGGATAAGGTATCTGGCAAAATTATTTTAGGAGGTCAGAAGGATGAGAAGCAATTAAAGATTTCTCCAACCATCATATTGGATGCCCCAGAAGATTCTATGGTAATGCAAGAGGAGATATTTGGGCCAATAATGCCAATTATCACTGTTGACAACATAGAAGATAGCTTTAGTATAATCAAATCAAAGCCAAAACCTCTTGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTGGAAAACATATCTTCTGGAGGGATGCTCATCAATGACACTATCTTACATGTTGCAGTTCGTGGTTTGCCATTTGGAGGAGTTGGAGAGAGTGGAATGGGTTCATACCATGGAAAATTCTCATTTGATGGTTTCAGTCATAAGAAGGCAGTCCTATATAGAAGTTTTGATGCAGATTCATCCTTAAGGTATCCCCCATATACACCCGAAAAGCAAAAATTGTTGAAGGCTCTTATCAGTGGCAACATTTTTCGCATAATTCTTACTTTGATTGGATGGTCTAAAGAATAA 1632 0.4062 MKSLCSAMFFHASAPVRSRAFSDHLTRKSFGKQLYFHSRCLVFSSYSGSASLSVMEEVEEKPIFDGEKADLLVKELRKNFDSGKTKSYKWRISQLEGIAKMLEEREKDIITAVYKDLSKPGFEAFISEVSQTRSSCSEALKELNHWMKPEKVKTSITTYPSTAEIVSEPLGVVLVISTWNFPFLLSLDPVIGAISAGNAVVLKPSEIAPATSSLLANLLKDYVDNSAIRVIEGAVPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSNVNLKVTARRIVAGKWATNSGQACISVDYIITKKEFAPTLINALKEELEQFFGNDPMESKDMSRIVSPTQFARLVKLLDEDKVSGKIILGGQKDEKQLKISPTIILDAPEDSMVMQEEIFGPIMPIITVDNIEDSFSIIKSKPKPLAAYLFTNNEQLKKDYVENISSGGMLINDTILHVAVRGLPFGGVGESGMGSYHGKFSFDGFSHKKAVLYRSFDADSSLRYPPYTPEKQKLLKALISGNIFRIILTLIGWSKE 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2012g00017 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 278 478 IPR016163 GO:0016620
Gabi2012g00017 543 FunFam Aldehyde dehydrogenase 278 478 - -
Gabi2012g00017 543 PIRSF ALDH 51 538 IPR012394 GO:0006081
Gabi2012g00017 543 FunFam Aldehyde dehydrogenase 77 281 - -
Gabi2012g00017 543 SUPERFAMILY ALDH-like 70 514 IPR016161 GO:0016491
Gabi2012g00017 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 496 IPR016162 GO:0016491
Gabi2012g00017 543 PANTHER ALDEHYDE DEHYDROGENASE 69 533 IPR012394 GO:0006081
Gabi2012g00017 543 Pfam Aldehyde dehydrogenase family 64 498 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2012g00017 Gabi-Chr2012 177435 181975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2012g00017 1 543 Aldehyde Dehydrogenase Gene Family AT4G34240 62.868 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2012g00017 K00128 - gmx:100800699 889.026