Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2012g00016 ATGAAAAGCCTATGTTCTGCGATGTTCTTTCATGCCAGTGCCCCAGTTCGCAGCAGAGCCTTTTCAGACCATTTAACTAGAAAGAGCTTTGGAAAGCAACTTTACTTCCACTCCCGTTGCCTTGTTTTCTCTTCATACTCAGGTTCTGCATCTCTATCAGTAATGGAAGAAGTTGAAGAGAAGCCTATATTTGATGGAGAGAAGGCTGATTTGCTTGTTAAGGAGCTTAGAAAGAACTTTGATTCAGGCAAGACAAAAAGCTATAAATGGAGGATTTCCCAGTTAGAGGGCATAGCTAAGATGCTAGAAGAGAGGGAGAAGGACATTATTACCGCAGTATATAAGGACCTTTCTAAACCAGGATTCGAAGCATTTATATCTGAGGTGTCTCAGACAAGATCCTCATGTAGTGAAGCACTTAAAGAACTGAATCACTGGATGAAGCCTGAAAAGGTAAAGACTTCAATTACAACATATCCATCAACAGCAGAGATTGTGTCAGAACCACTGGGAGTTGTGTTGGTCATCTCAACATGGAACTTTCCTTTCTTGTTATCACTTGATCCGGTCATTGGTGCAATTTCAGCGGGCAATGCAGTGGTTCTGAAACCATCAGAAATTGCTCCAGCAACATCATCACTGCTTGCAAATTTGCTCAAAGATTATGTAGACAACTCTGCAATAAGAGTTATTGAAGGGGCTGTTCCTGAAACAACTGCACTCTTGGAGCAGAAGTGGGATAAGATACTATACACTGGTAGTGCTAGAGTAGGCCGCATTGTCATGGCTGCTGCTGCAAAGCACCTCACCCCAGTAATTCTGGAACTTGGAGGAAAGTGCCCAGCTGTTGTTGATTCAAATGTCAACTTAAAAGTTACTGCTAGGAGGATAGTAGCTGGAAAGTGGGCTACCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAAAAAGGAATTTGCTCCAACACTTATAAATGCTCTGAAAGAGGAATTGGAGCAATTTTTTGGGAACGATCCAATGGAATCAAAAGACATGTCACGTATTGTGTCTCCAACCCAATTTGCACGGCTTGTGAAGCTCTTGGATGAGGATAAGGTATCTGGCAAAATTATTTTAGGAGGTCAGAAGGATGAGAAGCAATTAAAGATTTCTCCAACCATCATATTGGATGCCCCAGAAGATTCTATGGTAATGCAAGAGGAGATATTTGGGCCAATAATGCCAATTATCACTGTTGACAACATAGAAGATAGCTTTAGTATAATCAAATCAAAGCCAAAACCTCTTGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTGGAAAACATATCTTCTGGAGGGATGCTCATCAATGACACTATCTTACATTTCGTGGTTTGCCATTTGGAGGAGTTGGAGAGAGTGGAATGGGTTCATACCATGGAAAATTCTCATTTGATGGTTTCAGTCATAAGAAGGCAGTCCTATATAGAAGTTTTGATGCAGATTCATCCTTAA 1521 0.4083 MKSLCSAMFFHASAPVRSRAFSDHLTRKSFGKQLYFHSRCLVFSSYSGSASLSVMEEVEEKPIFDGEKADLLVKELRKNFDSGKTKSYKWRISQLEGIAKMLEEREKDIITAVYKDLSKPGFEAFISEVSQTRSSCSEALKELNHWMKPEKVKTSITTYPSTAEIVSEPLGVVLVISTWNFPFLLSLDPVIGAISAGNAVVLKPSEIAPATSSLLANLLKDYVDNSAIRVIEGAVPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSNVNLKVTARRIVAGKWATNSGQACISVDYIITKKEFAPTLINALKEELEQFFGNDPMESKDMSRIVSPTQFARLVKLLDEDKVSGKIILGGQKDEKQLKISPTIILDAPEDSMVMQEEIFGPIMPIITVDNIEDSFSIIKSKPKPLAAYLFTNNEQLKKDYVENISSGGMLINDTILHFVVCHLEELERVEWVHTMENSHLMVSVIRRQSYIEVLMQIHP 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2012g00016 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 277 IPR016162 GO:0016491
Gabi2012g00016 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 278 470 IPR016163 GO:0016620
Gabi2012g00016 506 PANTHER ALDEHYDE DEHYDROGENASE 69 470 IPR012394 GO:0006081
Gabi2012g00016 506 FunFam Aldehyde dehydrogenase 278 471 - -
Gabi2012g00016 506 FunFam Aldehyde dehydrogenase 77 281 - -
Gabi2012g00016 506 Pfam Aldehyde dehydrogenase family 64 461 IPR015590 GO:0016491
Gabi2012g00016 506 SUPERFAMILY ALDH-like 70 470 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2012g00016 Gabi-Chr2012 177431 181975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2012g00016 1 470 Aldehyde Dehydrogenase Gene Family AT4G34240 61.783 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2012g00016 K00128 - gmx:100800699 755.747