Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2012g00014 ATGGCAGCTTCCAGTGAGAAAGAATGGTACTTTTTTTCTCCAAGGGACCGGAAATATCCGAACGGTTCACGGCCGAACCGGGCCGCCGGTAGCGGGTATTGGAAAGCAACCGGAGCTGACAAACCGATTGGAAAACCGAAAGCACTTGGGATTAAGAAGGCACTTGTTTTCTACGCAGGGAAAGCCCCTAAAGGCATGAAAACCAATTGGATTATGCATGAATATCGCCTTGCCAATGTTGATAGATCAGCCAAAAAGAAAAACAACTTGAGGCTTGATGATTGGGTGCTGTGTCGAATTTATAATAAGAAAGGGAAGGTTGAGAAATACAACAACACGGTACCAAAATTTTCAGGGGAGGTTCATGTTAACTATGAGCATGAGAATGAGACGAAGCCAGAAATCCATAAATTCGCGAATGACCAATTGTACATGGACACGTCGGATTCGGTGCCACGTCTGCACACGGACTCGAGCTGCTCGGAGCACGTGGTTTCACCGGATGTCACGTGCGACAGGGAGGTTCAGAGCGAGCCAAAGTGGAATGAACTGGAGCTACAGCTAGATGACACGTTATTTGATTTTCAGTTCAATTACTTGGATGATAATAACCTGTCGGTGGATGACCCTTTTGGCACTCAGGCCCAGGCCCAGGCCCAGTACCAGATCAACCAGCTCTCGCCATTGCAGGACATGTTCATGTTCCTACAGAAGCCATTTTAA 723 0.473 MAASSEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGMKTNWIMHEYRLANVDRSAKKKNNLRLDDWVLCRIYNKKGKVEKYNNTVPKFSGEVHVNYEHENETKPEIHKFANDQLYMDTSDSVPRLHTDSSCSEHVVSPDVTCDREVQSEPKWNELELQLDDTLFDFQFNYLDDNNLSVDDPFGTQAQAQAQYQINQLSPLQDMFMFLQKPF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2012g00014 240 Gene3D NAC domain 1 109 IPR036093 GO:0003677|GO:0006355
Gabi2012g00014 240 MobiDBLite consensus disorder prediction 16 36 - -
Gabi2012g00014 240 SUPERFAMILY NAC domain 4 103 IPR036093 GO:0003677|GO:0006355
Gabi2012g00014 240 ProSiteProfiles NAC domain profile. 1 103 IPR003441 GO:0003677|GO:0006355
Gabi2012g00014 240 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 157 - -
Gabi2012g00014 240 Pfam No apical meristem (NAM) protein 4 77 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2012g00014 Gabi-Chr2012 160932 162110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2012g00014 1 240 NAC Transcription Factor Family AT1G01720 60.317 2.40e-95 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi2012g00014 NAM 1.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2012g00014 - - gmx:100814504 389.808