Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2012g00009 ATGCTTTTGCAGCTGTTGCATCCTTTCTTCTTCCTATTCATCCTCCCGGTGCTAATCTTTTTCCTCTTCCTCAAACCATCTTCGGAGAAGAAAGCAAAAGAGACAGCTACAGTTACCCTCCCAAAAGCATATCCACTCATTGGTTCGTACTTAGCCATCAAAGCAAAAGAAAACACAAACTCTAACATCCAATGGTTATCTGATATACTCCAAATCTCACCTGCTGCCACCTTCACCCTCCACCGCCCCTTGGGCCGCCGGCAAGTCATCACCGGCAACCCCGCCACCATACAACACATTCTCAAGACCCGTTTCTCCATTTACCAAAAGGGCCACAACTTTCTCGAAACCCTCTCCGATTTCCTCGGAACCGGAATCTTCAACACCAACGGCGACAACTGGAAGTTTCAGAGACAAGTCGCCAGCCACGAATTCAACACAAACTCTCTGCGGAAATTCGTCGAACACGTGGTGGACACCGAGCTCTCCAACCGCCTCATCCCCATACTCACTTCAGCATCCCAAGACCAAAAAACCCTGAATTTCCAAGACATCCTCCAACGCTTCGCGTTCGACAACATTTGCAAAATCGCGTTCGGGTTCGACCCAGAATACCTTGCGCCGTCCGTTGAACGGAGCAAGTTCGCGCTAGCTTTCGAGGAAGCGACCGTGATCAGCAGCAAACGGTTCCGCGAACCGTCAGAGTTAATCTGGAAAATCAAGAGAAAGCTCAACATAGGATCTGAAAAACGACTGCGTATCGCAGTTTCAGAAGTACATGAATTCGCGAAGAACATAGTGAGGAAAAAGAAGCGCGAGCTGAAGGAGAAGTCATCGCTTGAATCGGTTGACATGCTGTCGCGGTTCTTGAGTTCGGGTCACTCCGACGAGGACTTCGTCACAGACATTGTCATAAGTTTCATACTGGCCGGAAAAGACACGACGTCAGCGGCGTTAACCTGGTTTTTCTGGCTGCTGTCGAAGAACCCGCGTGTGGAGAACGAGATTGTGAAAGAGATAAGGGATAAATCGGAAACCCCAGCGTACGATGAAGTGAAGGATATGGTTTACACACACGCTGCGTTGTGCGAGAGCATGAGGCTGTACCCGCCGGTGCCGACGGACAGCAAGGAAGCGGTTGAGGATGACGTTTTGCCGGACGGGACGGTGGTGAAGAAGGGGACGGTGGTGGTGTATCACGTGTACGCAATGGGGAGGTTGGAGAGTATTTGGGGAAATGATTGGGCAGAGTTTCGGCCCGAGAGGTGGTTAGAGAAGGTTGGTGATTCGGGAAAGTGGAAGTTCGTTGCGAGAGATTCGTTCAGTTATCCAGTCTTTCAGGCGGGTCCCAGGATTTGCTTGGGGAAGGAAATGGCTTTTATGCAGATGAAGAGGGTGGTGGCTGGTGTCCTCAGGCAGTTCAAGGTGGTGCCCGCGGTGGCGGAAGGGGTGGAGCCCAACTTCGTTTCGTTCTTGACGTCCCAAATGGAAGGTGGGTTCCACGTGAAAATCCTCGAAAGGCTTGCTTGA 1530 0.5111 MLLQLLHPFFFLFILPVLIFFLFLKPSSEKKAKETATVTLPKAYPLIGSYLAIKAKENTNSNIQWLSDILQISPAATFTLHRPLGRRQVITGNPATIQHILKTRFSIYQKGHNFLETLSDFLGTGIFNTNGDNWKFQRQVASHEFNTNSLRKFVEHVVDTELSNRLIPILTSASQDQKTLNFQDILQRFAFDNICKIAFGFDPEYLAPSVERSKFALAFEEATVISSKRFREPSELIWKIKRKLNIGSEKRLRIAVSEVHEFAKNIVRKKKRELKEKSSLESVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLSKNPRVENEIVKEIRDKSETPAYDEVKDMVYTHAALCESMRLYPPVPTDSKEAVEDDVLPDGTVVKKGTVVVYHVYAMGRLESIWGNDWAEFRPERWLEKVGDSGKWKFVARDSFSYPVFQAGPRICLGKEMAFMQMKRVVAGVLRQFKVVPAVAEGVEPNFVSFLTSQMEGGFHVKILERLA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2012g00009 509 CDD CYP86A 77 500 - -
Gabi2012g00009 509 SUPERFAMILY Cytochrome P450 41 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00009 509 PANTHER CYTOCHROME P450 27 502 - -
Gabi2012g00009 509 Gene3D Cytochrome P450 22 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00009 509 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00009 509 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00009 509 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00009 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00009 509 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00009 509 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00009 509 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00009 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00009 509 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00009 509 Pfam Cytochrome P450 40 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2012g00009 Gabi-Chr2012 98697 100226 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2012g00009 12 507 Cytochrome P450 AT5G63450 48.200 1.81e-156 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2012g00009 K20769 K13407 gmx:100795308 765.763