Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2012g00007 ATGATTCACATGCTGTTGCATCCTTTGTTCTTCCTATTCATCCTCCCAGTGCTAATCTTTTTCCTCTTCCTCAAACCATCTTCGGCGAAGAAAGCACCAAAAGCATACCCACTCATTGGTTCGTACTTAGCCATCAAAGCAAACGAAAACACCAACATCCAATGGTTATCTGATATAGTCCAAATCTCACCTGCTGCCACCTTCACCCTCCACCGCCCCTTGGGCCGCCGGCAAGTCATCACCGGCAACCCCGCCATCGTACAGCACATTCTCAAGACCCGTTTCTCCATTTACCAAAAGGGCCACATCTTTCTCGAAACCCTCTCCGATTTCCTCGGAACCGGAATCTTCAACACCAACGGCGACAACTGGAAGTTTCAGAGACAAGTCGCCAGCCACGAATTCAACACAAACTCTCTGCGGAAATTCGTCGAACACGTTGTCGACACCGAGCTCTCCAACCGGCTCATCCCCATACTCACTTCAGCATCCCAAGACCAAAAAACCCTCAATTTCCAAGACATCCTCCAACGATTCACGTTCGACAACATTTGCAAAATCGCGTTCGGGTTCGACCCAAAATACCTTGCACCGTCCGTTGAACGGAGCAAGTTCGCGCTAGCTTTCGAGGAGGCGACCATGATCAGCAGCAAACGGTTCCGCGAACCGTCAGAGTTAATCTGGAAAATCAAGAGAAAGCTCAACATAGGATCTGAAAAACGACTGCGTATTGCAGTTTCAGAAGTACATGAATTCGCGAAGAACATAGTGAGAGGAAAGAAGCGCGAGCTGGAGGAGAAGTCCTCACTTGAATCGGTTGACATGCTGTCGCGGTTCTTGAGTTCGGGTCATTCCGACGAGGAATTCGTCACATACATTGTCATAAGCTTCATACTGGCCGGAAAAGACACGACGTCAGCGGCGTTAACTTGGTTTTTCTGGCTGCTGTCGAAGAACCCGCGTGTGGAGAACGAGATTGTGAAAGAGATAATGGAAAAATCGGAAACCCCAGCGTACGATGAAGTGAAGGATATGGTTTACACACACGCTGCGTTGTGCGAGAGCATGAGGCTGTACCCGCCGGTGCCGATGGACAGCAAGCAAGCGATTGAGGATGACGTGTTGCCGGACGGGACGGTGGTGAAGAAGGGGATGGTGGTGTTTTATAGCGTGTACGCGATGGGGAGGTTAGAGAGTATTTGGGGTAATGATTGGGCGGAGTTTCGGCCCGAGAGGTGGTTAGAGAAGGTTGGTGATTCGGGAAAGTTGAAGTTCGTTGCGAGAGATTCGTTCAGTTATCCAGTCTTTCAGGCGGGTCCCAGGATTTGCTTGGGGAAGGAAATGGCTTTTATGCAGATGCAGAGGGTGGTGGCTGGTATCCTCAGGCAGTTCAAGGTGGTGCCGACGGTTGCGGAAGGGGTGGAGCCTAACTTCGTTTCGTTCTTGACGTCCCAAATGGAAGGTGGGTTCCACGTGAAAATCCAGGAAAGGCTTGCTTAA 1500 0.504 MIHMLLHPLFFLFILPVLIFFLFLKPSSAKKAPKAYPLIGSYLAIKANENTNIQWLSDIVQISPAATFTLHRPLGRRQVITGNPAIVQHILKTRFSIYQKGHIFLETLSDFLGTGIFNTNGDNWKFQRQVASHEFNTNSLRKFVEHVVDTELSNRLIPILTSASQDQKTLNFQDILQRFTFDNICKIAFGFDPKYLAPSVERSKFALAFEEATMISSKRFREPSELIWKIKRKLNIGSEKRLRIAVSEVHEFAKNIVRGKKRELEEKSSLESVDMLSRFLSSGHSDEEFVTYIVISFILAGKDTTSAALTWFFWLLSKNPRVENEIVKEIMEKSETPAYDEVKDMVYTHAALCESMRLYPPVPMDSKQAIEDDVLPDGTVVKKGMVVFYSVYAMGRLESIWGNDWAEFRPERWLEKVGDSGKLKFVARDSFSYPVFQAGPRICLGKEMAFMQMQRVVAGILRQFKVVPTVAEGVEPNFVSFLTSQMEGGFHVKIQERLA 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2012g00007 499 CDD CYP86A 67 490 - -
Gabi2012g00007 499 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00007 499 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00007 499 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00007 499 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00007 499 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00007 499 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00007 499 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00007 499 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00007 499 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00007 499 Gene3D Cytochrome P450 26 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00007 499 PANTHER CYTOCHROME P450 21 492 - -
Gabi2012g00007 499 SUPERFAMILY Cytochrome P450 33 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2012g00007 499 Pfam Cytochrome P450 33 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2012g00007 Gabi-Chr2012 80329 81959 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2012g00007 9 497 Cytochrome P450 AT5G63450 47.791 1.44e-152 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2012g00007 K20769 K13407 gmx:100818199 747.658