Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2006g00017 ATGATCAACAAGAGTGTTCATCAGCTATTCAAACCTGATATGGAGATTGTGGATACCAGAAAACTACAGCTACAAAAGGAGCAGCATTTTCATGTGCTGGCAGTAGATGACAGTGTCATAGATAGGAAGCTTTTGGAGAGGCTCCTTACAGGTTCTTCATGCAAAGTTACCTGCGTGGATTCTGGAGACAAGGCTTTGAAATACCTTGGCCTGATTGATGACCTTGATAATACTTCCTCTATGTCTTTGGAGTCATCACCTTCTCCTCCTCAACCATTACAGCAAGAGGGAATCAAAGTGAATTTGATCATGACAGACTATTGCATGCCTGGGATGAGTGGCTATGATTTACTTAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTCGTGGTTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTGGAAGGAGGGGCTGAGGAGTTTCTATTGAAGCCTCTTCAGTTATCGGATTTGGAGAAGCTTCAACCATACTTTCTGAAATCCCTTGATAATTCTCGTGAACAAGAATCTGCTAACAGTTCCATAGATTCCGACACTGACAATCTCATCATCAACAACAATAACAGTAACAATAACAATAGTATTATGAGCAAAAGGAAGGCCATGTCTCCTGAGCTTCCCGAGAGATCAAGAACCAAAATGAAAGGGTTGGCGGTGGTGTGA 702 0.4202 MINKSVHQLFKPDMEIVDTRKLQLQKEQHFHVLAVDDSVIDRKLLERLLTGSSCKVTCVDSGDKALKYLGLIDDLDNTSSMSLESSPSPPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSRISMCLEGGAEEFLLKPLQLSDLEKLQPYFLKSLDNSREQESANSSIDSDTDNLIINNNNSNNNNSIMSKRKAMSPELPERSRTKMKGLAVV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2006g00017 233 Pfam Response regulator receiver domain 32 166 IPR001789 GO:0000160
Gabi2006g00017 233 Gene3D - 31 228 - -
Gabi2006g00017 233 SMART REC_2 30 168 IPR001789 GO:0000160
Gabi2006g00017 233 SUPERFAMILY CheY-like 30 185 IPR011006 -
Gabi2006g00017 233 PANTHER TWO-COMPONENT RESPONSE REGULATOR 28 210 IPR045279 GO:0009736
Gabi2006g00017 233 CDD REC_typeA_ARR 32 167 - -
Gabi2006g00017 233 ProSiteProfiles Response regulatory domain profile. 31 172 IPR001789 GO:0000160
Gabi2006g00017 233 MobiDBLite consensus disorder prediction 178 233 - -
Gabi2006g00017 233 MobiDBLite consensus disorder prediction 178 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2006g00017 Gabi-Chr2006 171758 174551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2006g00017 22 187 Response Regulator Gene Family AT3G57040 55.357 1.13e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2006g00017 Response_reg 4.3e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2006g00017 K14492 - gmx:100786187 317.005