Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2006g00016 ATGATCAACAAGAGTGTTCATCAGCTATTCAAACCTGATATGGAGATTGTGGATACCAGAAAACTACAGCTACAAAAGGAGCAGCATTTTCATGTGCTGGCAGTAGATGACAGTGTCATAGATAGGAAGCTTTTGGAGAGGCTCCTTACAGGTTCTTCATGCAAAGTTACCTGCGTGGATTCTGGAGACAAGGCTTTGAAATACCTTGGCCTGATTGATGACCTTGATAATACTTCCTCTATGTCTTTGGAGTCATCACCTTCTCCTCCTCAACCATTACAGCAAGAGGGAATCAAAGTGAATTTGATCATGACAGACTATTGCATGCCTGGGATGAGTGGCTATGATTTACTTAAACGAGTCAAGCTGCAGGGATCTTCTTGGAAAGATGTTCCAGTCGTGGTTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTGGAAGGAGGGGCTGAGGAGTTTCTATTGAAGCCTCTTCAGTTATCGGATTTGGAGAAGCTTCAACCATACTTTCTGAAATCCCTTGATAATTCTCGTGAACAAGAATCTGCTAACAGTTCCATAGATTCCGACACTGACAATCTCATCATCAACAACAATAACAGTAACAATAACAATAGTATTATGAGCAAAAGGAAGGCCATGTCTCCTGAGCTTCCCGAGAGATCAAGAACCAAAATGAAAGGGTTGGCGGTGGTGTGA 708 0.4223 MINKSVHQLFKPDMEIVDTRKLQLQKEQHFHVLAVDDSVIDRKLLERLLTGSSCKVTCVDSGDKALKYLGLIDDLDNTSSMSLESSPSPPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKLQGSSWKDVPVVVMSSENVPSRISMCLEGGAEEFLLKPLQLSDLEKLQPYFLKSLDNSREQESANSSIDSDTDNLIINNNNSNNNNSIMSKRKAMSPELPERSRTKMKGLAVV 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2006g00016 235 Gene3D - 31 230 - -
Gabi2006g00016 235 SUPERFAMILY CheY-like 30 189 IPR011006 -
Gabi2006g00016 235 ProSiteProfiles Response regulatory domain profile. 31 174 IPR001789 GO:0000160
Gabi2006g00016 235 CDD REC_typeA_ARR 32 169 - -
Gabi2006g00016 235 PANTHER TWO-COMPONENT RESPONSE REGULATOR 28 212 IPR045279 GO:0009736
Gabi2006g00016 235 Pfam Response regulator receiver domain 32 168 IPR001789 GO:0000160
Gabi2006g00016 235 SMART REC_2 30 170 IPR001789 GO:0000160
Gabi2006g00016 235 MobiDBLite consensus disorder prediction 180 235 - -
Gabi2006g00016 235 MobiDBLite consensus disorder prediction 180 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2006g00016 Gabi-Chr2006 171756 174551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2006g00016 22 189 Response Regulator Gene Family AT3G57040 54.438 9.33e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2006g00016 Response_reg 1.6e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2006g00016 K14492 - gmx:100786187 311.997