Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2006g00012 ATGGCAGAGCGTGTGTTACTCACTCCTTCACTGCCTTTACCATCTCAACCGTCTCTAACCAAAATGGCTGCATTGGGTGGCGCCGCCGCCGCTCGCATGATCCCCTCCGCTACCAGAGCCTCCCTCTCACTCTCCTCCTCTTCCCGTTCGCTTTTCTCGTGCTCATCGAAATCTTCCTCTTTCTCTTCTGGTTCTGATTCCAAGCTCGATTGCTTGCTGTCCTCTCCTCGCATTTCTCACCTGTTTCTCAATCAGCGAAGAGCAGAGGTTCGTGTTTCGAGAGGAGGATACGGAACAGTGTCTGCGCCGAATTCCTTTGCGTCTGATCCTGATCAGCTGAAGAACGCTAGGGAAGACATCAAGGAGCTTCTCAGGACCAAGTTCTGTCATCCTCTTCTGATTCGTTTGGGATGGCATGATGCTGGTACTTACAATAAGAATATTGAGGAGTGGCCACAGAGAGGTGGAGCTAATGGTAGCTTAAGATATGAAGTTGAGCTGAAACATGCAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTTCAGCCAATCAAAGACAAATACTCTAGTGTAACATATGCAGACTTATTTCAGTTGGCTGGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCAAAAATTCCTATGATATATGGAAGAGTGGATGTCTCTGGACCTGAACAATGCCCTGAGGAAGGGAGACTTCCTGATGCTGGCCCCCCTTCACCTGCTGATCATTTGCGTCAAGTTTTCTACCGAATGGGTTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCCCACACACTGGGGCGGTCTAGACCAGATCGTAGTGGCTGGGGCAAGCCTGAAACTAAATATACGAAAGATGGGCCGGGAGCACCTGGAGGACAATCCTGGACAGTGCAATGGTTGAAGTTTGACAACTCTTACTTCAAGGACATCAAACAAAAGAAGGATGAAGATCTATTGGTATTGCCAACTGATGCTGCTCTTTTTGAAGATCCATCCTTCAAGGTATACGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCCCATGCCAAACTTAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGCATTGTGATAGATGGTTCTCCAAATGCCGGAGCAGAGAAGTTTCAAGCAGCCAAGTACTCCTCTGGAAAGGAGTAA 1200 0.4758 MAERVLLTPSLPLPSQPSLTKMAALGGAAAARMIPSATRASLSLSSSSRSLFSCSSKSSSFSSGSDSKLDCLLSSPRISHLFLNQRRAEVRVSRGGYGTVSAPNSFASDPDQLKNAREDIKELLRTKFCHPLLIRLGWHDAGTYNKNIEEWPQRGGANGSLRYEVELKHAANAGLVNALKLLQPIKDKYSSVTYADLFQLAGATAVEEAGGPKIPMIYGRVDVSGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKQKKDEDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDGSPNAGAEKFQAAKYSSGKE 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2006g00012 399 PRINTS Haem peroxidase superfamily signature 130 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2006g00012 399 PRINTS Haem peroxidase superfamily signature 192 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2006g00012 399 PRINTS Haem peroxidase superfamily signature 210 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2006g00012 399 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2006g00012 399 PRINTS Haem peroxidase superfamily signature 300 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2006g00012 399 CDD ascorbate_peroxidase 101 371 - -
Gabi2006g00012 399 FunFam L-ascorbate peroxidase T, chloroplastic 238 361 - -
Gabi2006g00012 399 Gene3D - 116 369 - -
Gabi2006g00012 399 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 101 370 IPR044831 GO:0004601|GO:0034599
Gabi2006g00012 399 PRINTS Plant ascorbate peroxidase signature 329 353 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2006g00012 399 PRINTS Plant ascorbate peroxidase signature 109 129 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2006g00012 399 PRINTS Plant ascorbate peroxidase signature 130 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2006g00012 399 PRINTS Plant ascorbate peroxidase signature 191 209 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2006g00012 399 PRINTS Plant ascorbate peroxidase signature 210 222 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2006g00012 399 Gene3D Peroxidase, domain 2 238 361 - -
Gabi2006g00012 399 MobiDBLite consensus disorder prediction 267 295 - -
Gabi2006g00012 399 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 116 240 - -
Gabi2006g00012 399 ProSitePatterns Peroxidases proximal heme-ligand signature. 260 270 IPR019793 -
Gabi2006g00012 399 SUPERFAMILY Heme-dependent peroxidases 110 369 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2006g00012 399 Pfam Peroxidase 117 348 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2006g00012 399 ProSiteProfiles Plant heme peroxidase family profile. 133 395 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2006g00012 Gabi-Chr2006 85611 94701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2006g00012 116 366 Peroxidase AT5G66390 27.835 7.25e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2006g00012 K00434 - gmx:100802238 668.307