Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2006g00002 ATGTCGGATCTGGAGTTAGGGAAGAAAGTGTTCGACGCTGAAACGGCGTCGTTGCTAGTGAAGGAGCTTAGGGGCAGCTTCGCTTCTGGTAGGACGCGAAGTCACGAGTGGAGAGTCTCGCAAGTGAAGGCTCTTTTGAAGTTCCTCGTTGATCACGAGGACCAGATCGTTGATGCTCTACTTTCCGACCTCGCCAGGCCCCCATTCGAAACCGTCGTCTACGAGATTGGTATACTTAAAAACTCATGTGAAGTCACACTGAAGGAATTGAAACATTGGATGATGCCAGAAAAGGTTAAAACTTCAACCACAACTTTTCCTTCTTCAGCTGAAATAGTACCTGAACCGCTGGGTGTTGTGTTAGTCATATCTCCATGGAACTATCCATTTTTGTTGTCTCTTGATCCAGTCATTGGAGCTATAGCAGCTGGTAATGCTGTGGTTCTTAAACCATCAGAAATTGCTCCTGCTTCATCGTCACTGCTGGCAAAATTGTTAGGGAAGTACATGGATAATTCATCTATAAAAGTTGTCGAGGGGGCAATTGATGAAACCTCGGCACTATTGCAGCAAAAGTGGGACAAAATTTTCTTTACAGGTAGTGGAAGAGTGGGACGCATAGTGATGGCTGCTGCAGCAAAACACCTTACACCAGTTGGTCTGGAGCTTGGAGGAAAATCTCCAGCTGTTGTTGATTCAAATATCAATATACAGGTAGCAACTAGACGGATAATTGCAGGCAAGTGGGGTACTAACAGTGGACAAGCCTGCGTTTCTCCAGATTATATTATAACAACAAAAGACCATGCTCCCAAGTTGGTGGACACCCTAAAGACTGAATTGGAGAAGTTTTTTGGAAAGAACCCGTTGGAATCAGAAGATATGTCTCGCATTGTGAATTCCAACCACTTTGCTCGCTTGACAAAGCTCTTGGAGGATGATAAGGTTTCAGGGAAGATTGTTTATGGAGGTGAAAAGGATGAAAGCAAATTGAGGATTGCTCCTACTATTTTATTGGATGTTCCGACAGATTCTCTGGTAATGAGTGACGAGATATTTGGTCCATTGCTTCCCATCGTCACGGTCAATAAACTGGAAGAAAGCTTCGATGTGATAAACTCAGGAACAAAGCCCCTCGCTGCATATTTGTTTACAACCAATAAGAAGCTTAAGGAGCAGTTTGTAATGAAGGTTTCTGCTGGGGGTGTGCTTGTCAATGACACTCTCTTACATCTCGCCGTCCATACTTTGCCATTTGGGGGAGTTGGGGAGAGTGGAATGGGTGCATACCATGGGAAATTCTCCTTTGATGCTTTTACACACAAAAAAGCAGTTCTTTATCGCGGTTTAATTGATGCATCAATAAGGTACCCACCATACACGAATACAAAGATGAGGTTGATGAAGGCTATCGTTGGTGGTGGTATTCTTAGTATAATTCGTGCTCTTTTTGGAAGTTCTTATGCTTAA 1470 0.4361 MSDLELGKKVFDAETASLLVKELRGSFASGRTRSHEWRVSQVKALLKFLVDHEDQIVDALLSDLARPPFETVVYEIGILKNSCEVTLKELKHWMMPEKVKTSTTTFPSSAEIVPEPLGVVLVISPWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPASSSLLAKLLGKYMDNSSIKVVEGAIDETSALLQQKWDKIFFTGSGRVGRIVMAAAAKHLTPVGLELGGKSPAVVDSNINIQVATRRIIAGKWGTNSGQACVSPDYIITTKDHAPKLVDTLKTELEKFFGKNPLESEDMSRIVNSNHFARLTKLLEDDKVSGKIVYGGEKDESKLRIAPTILLDVPTDSLVMSDEIFGPLLPIVTVNKLEESFDVINSGTKPLAAYLFTTNKKLKEQFVMKVSAGGVLVNDTLLHLAVHTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRGLIDASIRYPPYTNTKMRLMKAIVGGGILSIIRALFGSSYA 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2006g00002 489 PIRSF ALDH 6 480 IPR012394 GO:0006081
Gabi2006g00002 489 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 221 228 IPR029510 GO:0016491
Gabi2006g00002 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 425 IPR016163 GO:0016620
Gabi2006g00002 489 FunFam Aldehyde dehydrogenase 24 228 - -
Gabi2006g00002 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 443 IPR016162 GO:0016491
Gabi2006g00002 489 Pfam Aldehyde dehydrogenase family 20 445 IPR015590 GO:0016491
Gabi2006g00002 489 SUPERFAMILY ALDH-like 19 461 IPR016161 GO:0016491
Gabi2006g00002 489 PANTHER ALDEHYDE DEHYDROGENASE 16 475 IPR012394 GO:0006081
Gabi2006g00002 489 FunFam Aldehyde dehydrogenase 225 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2006g00002 Gabi-Chr2006 28160 35442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2006g00002 76 485 Aldehyde Dehydrogenase Gene Family AT1G44170 72.506 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2006g00002 K00128 - gmx:100778722 776.548