Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2003g00023 ATGGCTGAAAACGGCGAAGAGAAGTTACTCGCTGTGGCGCGGCACATAGCAAAGACGCTAGGCCACAACAACAACAACATGGCCGATGATATCCTCCAAATATTCTCCAACTTCGATGGTAGATTCTCAAAGGAGAAGCTATCGGAAGAGGGTGCAGGCAATGATCCCCTGGGCTGCGTCGCACTCGAACAAACACTTAACTCTCTCGACCGTCGGATTTCACTCCACGTGTCCTCCGATCAACCCATATGGTCGAACTCCGCCGAATCTGCCTCCTTCCTCGACGCCGTTGACGAGCTCGTCGCTACCGTCAATGACTGGAGCCCCCTCGCCGATGATAAGACCGTTGGCGCGTGTCTCCTACGCGCTGAAGAGATGCTCCAGCAGGCCATGTTCCGCGCCGAGGACGAGTTCCGCTCTCTCATGGAACTCGGCAGCGAGTCATTCGACCTGACTCGGAACAACGGCGAGTCAAATCGGAAAGAAGACTCGTTGTTTGACTCCGACGACGACAACGAAGGCGAAGAAGATAATGACGGCGATGAGGATTTGATTCCGGTAGCTCTCCCGGTGGCCGATTTCGACGTGGTGATTGATGCGCTGCCGCCGGGGACGGTGAACGATCTCCGCGAGATCGCGAAGCGAATGGTTGCGGCTGGGTTCGGGAAGGAGTGTACGCGCGTGTACGGCGGTTGCCGGAGGGAGTTCTTGGAGGAGAGCTTGTCGAGGTTAGGGTTGCAGAAGCTGAGCATTTCGGAGGTTCACAAGATGCAATGGCAGGATCTCGAAGACGAGATCGAGCGATGGAACAAGGGCTCCAACGTCGCTCTCAGGATCCTCTTCCCCAGCGAGCGGCGTCTCTGCGATCGCGTCTTCTCCGGTTTCTCTTCCTCCGCCGCTGCCGAACTCTCCTTCATGGAGGTCTGCCGCGGATCGGCAATTCAGCTTCTGAACTTCGCTGACGCGGTCGCTATCGGAAGCCGCTCGCCGGAGCGGTTGTTCAGAGTCCTCGACGTGTTCGAGACAATGCGTGACCTAATTCCTGAATTTGAATCCCTGTTCTCCGATCAGTACTGCGCGTTCCTCGTCAACGAAGCTATCACAATTTGGAAGAGGTTAGGTGAAGCAATCAGAGGAATTTTCATGGAATTGGAGAATCTGATTGGCCGAGATCCGGCAAAGGCGGCGGTTCCCGGCGGCGGGCTTCATCCGATCACCCGTTACGTGATGAACTACCTCCGCGCCGCATGTCGCTCCCGCCAAACCCTAGAACTAGTTTTCCAGTTGCAACCAAATTCTTCGTTATCTGTCCAAATTGCTTGGATTATGGAGTTGTTAGAACGAAATTTGGAAGCAAAATCGAAAATATATAAGGACCCTGCGTTGTGCTCTGTTTTCATGATGAATAATGGGAGGTACATTGTTCAGAAGGCCAAAGATAGCGAATTGGGAACCCTTTTGGGTGACGATTGGATCCGAAAACACACTGCAAAAGTCCGGCAATGCCATGTGAGCTATCAAAGAAGCTCATGGAACAAGTTGCTGGGGTTTCTCAAAGTGGAGAATAACAATGGCTCAATGGCTGCAAAGCCTATGAAAGAGAAGCTCAAGTTGTTCAACTTGCATTTTGAGGAGATATGTAGGGTTCAGTCTCAATGGTTTGTCTTTGATGAGCAGCTCAAGGAAGAAATAAGGATCTCCCTAGAAAAGATCTTATTGCCTGCATATGGAAGCTTCATTGGAAGGTTCCAGAATGTTCCTGATCTTGGAAAGCATGCTGATAAGTATATCAAGTTTGGTGTGGAGGACATTGAAGCTCGGCTTAGCGATTTGTTTAATGGAAGCAGTGGATCAAATGGTGGCCGAAAGTGA 1872 0.5171 MAENGEEKLLAVARHIAKTLGHNNNNMADDILQIFSNFDGRFSKEKLSEEGAGNDPLGCVALEQTLNSLDRRISLHVSSDQPIWSNSAESASFLDAVDELVATVNDWSPLADDKTVGACLLRAEEMLQQAMFRAEDEFRSLMELGSESFDLTRNNGESNRKEDSLFDSDDDNEGEEDNDGDEDLIPVALPVADFDVVIDALPPGTVNDLREIAKRMVAAGFGKECTRVYGGCRREFLEESLSRLGLQKLSISEVHKMQWQDLEDEIERWNKGSNVALRILFPSERRLCDRVFSGFSSSAAAELSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRVLDVFETMRDLIPEFESLFSDQYCAFLVNEAITIWKRLGEAIRGIFMELENLIGRDPAKAAVPGGGLHPITRYVMNYLRAACRSRQTLELVFQLQPNSSLSVQIAWIMELLERNLEAKSKIYKDPALCSVFMMNNGRYIVQKAKDSELGTLLGDDWIRKHTAKVRQCHVSYQRSSWNKLLGFLKVENNNGSMAAKPMKEKLKLFNLHFEEICRVQSQWFVFDEQLKEEIRISLEKILLPAYGSFIGRFQNVPDLGKHADKYIKFGVEDIEARLSDLFNGSSGSNGGRK 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2003g00023 623 FunFam Exocyst subunit Exo70 family protein 76 619 - -
Gabi2003g00023 623 SUPERFAMILY Cullin repeat-like 84 612 IPR016159 -
Gabi2003g00023 623 MobiDBLite consensus disorder prediction 168 183 - -
Gabi2003g00023 623 MobiDBLite consensus disorder prediction 150 183 - -
Gabi2003g00023 623 Gene3D Exocyst complex component Exo70 82 621 - -
Gabi2003g00023 623 PANTHER EXOCYST COMPLEX PROTEIN EXO70 61 614 IPR004140 GO:0000145|GO:0006887
Gabi2003g00023 623 Pfam Exo70 exocyst complex subunit 268 610 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2003g00023 Gabi-Chr2003 256238 258145 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2003g00023 1 623 EXO70 exocyst subunit family AT5G58430 69.731 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2003g00023 K07195 - qsa:O6P43_020415 930.628