Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2003g00015 ATGGTAAAGATTGGCACTAACTCTACAACTCCCCTTCCCATTCTGTGTCATTCAGTTAATGATTTTCACCCTTCTGGCATCTTAACTAATGGTGACAACCCTTTAGCTTACCCCTTCTCACTACTAATTTTCCATCTCATTCTCGTCATTGCCATCACTCGCACTGTTCGTTTTCTTCTTAAGCCTCTCAGACAACCCGTAATCATTTCTCAAATAATCGGGGGTATGATAATTGGACCTTCTGTTCTTGGACGAAGTAAATGGTTTCAACGTCACATGATGCCAGCGACAGCACAATTCCTGGTGAACAATCTTGGAGTAATGGGATTCATGTTCTTTCTTTTCATTTATGGTGTGAAGATGGATCCTGGCCTATTAAGAAAGTCAGGAAGAATGCACGTGTCTACAGCAATTTTTGGTATACTCGTTCCCACAATGTCAGTTTTTTCGGTGGCTCTATACATGAGAAAGAACATGGATGCAGAACTAGCCACGATTTCTTCAATAGGAATACTTACAGGTTACTTGGGGATCACGGCATTTCCTGTTCTCTACAATGTCCTCAAAGAGCTTAATCTTTTGAACTCAGATGTAGGGAGAACGGCATTGTCCACAGCAATGATAGGAGATGCTTTTGGTGTTGGTACCGTTGTAGCATTTGAGGCAGGGAAACAAGGAGAATCAAGAACAGAGAATGCTTTGTGGTATATGCTTTGTCTATTTAGCTTGATGGCGTTTATTTTGTTTTGTGTTAGGCCTGCAATGGTTTGGATAAATAAGAAAACCCCAGAAGGTCAACCAGTGGATCAGTCTTATGTGGTTGCTATTCTTTTAGGGGTTTTTGTGATGGGCTTTATAACTGACATGTTAGGTATAGCTATTGCTAATGGGCCTTTGTGGTTGGGCTTAGCAATTCCTGATGGCCCACGTTTAGGAGCAACACTTGTAAACAAGAGCAAGACAATTATGACAGAGTTCCTTTTGCCATTCTCATTCGTTATTGTTGGATCATATACTGATATTTTTGCCATGGTTGCTGCTGATTGGTCTAGTTTGTCACCATTGTTTGTTATGGTTTTAACTGGCTACTTGACCAAATTCTTTTCCACTTGGATTGCTGCTTTCTATTGGCGCATGCCACTCAGGGATGGACTAACCTTCAGCCTCATTATGAGCTTAAGAGGCCAAATTGAACTCCTATTGTTTGTGCACTTGATGGACAAAAGGGTCTTAAAGCCGCCAGGCTTCACATTATTAGTGCTAATGACAACAGCACTGACTGCAACTTTCACACCTCTGATCTCCATATTATATGATCCAACAAGACCATACATTGTGAACCAAAGGAGGAACATCCAACACAACCCTCCAAACGCAGAACTTAGAATAGTGCTATGTGTTCTTGATGCTGAAAGCATAAATGGCCTCATCCATCTACTTGATCTCTCAAATCCAACCTCAACAAGTCCACTTTTAGTTTCTGCTCTTAGACTAATCGAGCTTGAAGGTCGTGCTAACCCTTTGCTCATAGACCATGAGAAACAAGAAGTGCCTCAAATTTATCAATGGACAAACACCATAAATGCCCTTGAGCGTTATCAACAACATAGAGGAGTGTTTGTGAAGCTACAATATTTCACAGCTGTGGCACCAAAGCAATCAATGTTCCAAGACATTTGTGAGCTATCACTTGAACAAGATGCTTCTTTAATCATCTTACCTTACAAGAAGATGCTATCTCCGAATTTACAAGTGTTAAAGCATGCACCTTGCTCTATTGCAATTCTTGTTGATAAGGGTCTTCTTGAAATCACCCCCTTGGGAAATTCTTTTCGTCAATGTAGATATAGATTTGCTGTGTTGTTTCTGGGTGGTGCAGATGCTAGAGAAGCTCTTGTTTATGCAGATAGGTTGATTGATAACCAAGATGTGTCTCTGACAGTGATAAGGTTCCTTTCTCATAACTATATAGGGGATGATGAAATGGAGAAGAAGCTTGATGATGGAACAGTGACTTGGTTTTGGGTTAAGAATGAGGTGAATCAAAGAGTGTTGTATAGAGAGGTTGTGGTTAGAGATGGAGAAGAAACAATAGCAGCAATTCAGGCTATGAATGATGGTGGTTATGATCTTTTGATAGTGGGAAGGAAACAAGGGATAAACCCTGTTCTTCTTACTGGATTATCAGAATGGGGTGAAAATGAAGAGTTGGGACTAATTGGAGACTATGTTTCCTCTGAAGATTTTTCTGGCTCAGCTTCTGTTTTAGTGGTTCATCAACAAATCCTAAGAGGATAG 2298 0.4051 MVKIGTNSTTPLPILCHSVNDFHPSGILTNGDNPLAYPFSLLIFHLILVIAITRTVRFLLKPLRQPVIISQIIGGMIIGPSVLGRSKWFQRHMMPATAQFLVNNLGVMGFMFFLFIYGVKMDPGLLRKSGRMHVSTAIFGILVPTMSVFSVALYMRKNMDAELATISSIGILTGYLGITAFPVLYNVLKELNLLNSDVGRTALSTAMIGDAFGVGTVVAFEAGKQGESRTENALWYMLCLFSLMAFILFCVRPAMVWINKKTPEGQPVDQSYVVAILLGVFVMGFITDMLGIAIANGPLWLGLAIPDGPRLGATLVNKSKTIMTEFLLPFSFVIVGSYTDIFAMVAADWSSLSPLFVMVLTGYLTKFFSTWIAAFYWRMPLRDGLTFSLIMSLRGQIELLLFVHLMDKRVLKPPGFTLLVLMTTALTATFTPLISILYDPTRPYIVNQRRNIQHNPPNAELRIVLCVLDAESINGLIHLLDLSNPTSTSPLLVSALRLIELEGRANPLLIDHEKQEVPQIYQWTNTINALERYQQHRGVFVKLQYFTAVAPKQSMFQDICELSLEQDASLIILPYKKMLSPNLQVLKHAPCSIAILVDKGLLEITPLGNSFRQCRYRFAVLFLGGADAREALVYADRLIDNQDVSLTVIRFLSHNYIGDDEMEKKLDDGTVTWFWVKNEVNQRVLYREVVVRDGEETIAAIQAMNDGGYDLLIVGRKQGINPVLLTGLSEWGENEELGLIGDYVSSEDFSGSASVLVVHQQILRG 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2003g00015 765 Pfam Sodium/hydrogen exchanger family 47 432 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Gabi2003g00015 765 Gene3D - 40 442 IPR038770 -
Gabi2003g00015 765 FunFam Cation/H(+) antiporter 24 40 445 - -
Gabi2003g00015 765 PANTHER CATION/H + ANTIPORTER 16 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2003g00015 Gabi-Chr2003 177393 180357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2003g00015 7 762 Antiporter Super Family AT5G37060 45.556 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2003g00015 K26731 - gmx:100783296 1061.6