Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2003g00014 ATGGCCACAGACGCGACAGCGAAATTCCAAAACCCCGATTTTCGCTCCGCTCCGCCCCCACCGGAGCCAGATTTCCACCCGGACCTGCCGGCGGCGACCCATGACGGCCTCCATTTCTGGCAGTTCATGGTCGCCGGATCCATCGCCGGCATGGTGGAGCACACGGCAATGTTCCCGGTGGACACGGTGAAGACCCACATGCAAGCTCTGGGTTCATGCCCCATAAAAAAAACCGTGACCGTTCGACAAGCCGTTCAATCGATTCTGAGATCCAACGGTCCCTCTGCATTGTACCGTGGCATTGGAGCAATGGGTCTTGGTGCTGGACCAGCACATGCCGTGTATTTTTCATTCTACGAGACTGGCAAGAAGCTATTCTCTGGTGGCAAACCCAACAACGCTGCTGCACACGCAGCTTCTGGGGTTTGTGCTACTGTTGCAAGTGATGCAGTGTTTACCCCTATGGATATGGTGAAGCAGAGGTTGCAATTGAGTAACAGCGGTTACAAGGGTGTTTGGGATTGTGTGCAAAGGGTTTTGAGCGAAGAGGGGCTAAGAGCGTTTTTTGCTTCTTATAGGACCACGGTTTTGATGAATGCACCTTTTACTGCGGTGCATTTTGCAACCTATGAGGCTGCCAAACGAGGCCTTATGGAGATTTCGCCAGAGAGTGCTGTAGATGAACGCTTGGCTGTTCATGCCACTGCTGGTGCTGCTGCTGGTGCTTTGGCTGCTGCACTTACAACCCCACTTGATGTGGTTAAAACTAAATTGCAGTGTCAGGGCGTCTGTGGATTGGATAAGTTTAAAAGTGATTCAATTGGGGATGTCTTTAAAACAATAGTGAAAAAGGATGGATACAGAGGGCTCATGCGAGGATGGAGTCCAAGGATGCTCTTCCATGCCCCTGCAGCCGCAATCTGCTGGTCCACATATGAAGCTGGGAAGGCCTTTTTCCACGACAATCAAAGTAAAAACAATGGCACGATACTCTAA 996 0.512 MATDATAKFQNPDFRSAPPPPEPDFHPDLPAATHDGLHFWQFMVAGSIAGMVEHTAMFPVDTVKTHMQALGSCPIKKTVTVRQAVQSILRSNGPSALYRGIGAMGLGAGPAHAVYFSFYETGKKLFSGGKPNNAAAHAASGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVWDCVQRVLSEEGLRAFFASYRTTVLMNAPFTAVHFATYEAAKRGLMEISPESAVDERLAVHATAGAAAGALAAALTTPLDVVKTKLQCQGVCGLDKFKSDSIGDVFKTIVKKDGYRGLMRGWSPRMLFHAPAAAICWSTYEAGKAFFHDNQSKNNGTIL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2003g00014 331 PANTHER MITOFERRIN-1-RELATED 36 324 - -
Gabi2003g00014 331 SUPERFAMILY Mitochondrial carrier 35 313 IPR023395 -
Gabi2003g00014 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 37 125 IPR018108 -
Gabi2003g00014 331 Gene3D Mitochondrial carrier domain 133 331 IPR023395 -
Gabi2003g00014 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 216 IPR018108 -
Gabi2003g00014 331 FunFam Mitochondrial RNA-splicing protein MRS3 167 329 - -
Gabi2003g00014 331 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Gabi2003g00014 331 PRINTS Mitochondrial carrier protein signature 55 69 IPR002067 GO:0055085
Gabi2003g00014 331 PRINTS Mitochondrial carrier protein signature 100 120 IPR002067 GO:0055085
Gabi2003g00014 331 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
Gabi2003g00014 331 PRINTS Mitochondrial carrier protein signature 42 55 IPR002067 GO:0055085
Gabi2003g00014 331 Pfam Mitochondrial carrier protein 132 219 IPR018108 -
Gabi2003g00014 331 Pfam Mitochondrial carrier protein 230 322 IPR018108 -
Gabi2003g00014 331 Pfam Mitochondrial carrier protein 37 127 IPR018108 -
Gabi2003g00014 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 318 IPR018108 -
Gabi2003g00014 331 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2003g00014 Gabi-Chr2003 130547 134279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2003g00014 1 327 Chloroplast and Mitochondria Gene Families AT2G30160 71.988 1.33e-164 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2003g00014 K15113 - gmx:100802640 531.946