Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2003g00002 | ATGTCTTCATCAATCTTATTTGCTCTTCTTTTGATTTTGCCTTGTCAATATTCATCTTCATTCTCCCTCTCTGTGGAGAAACTCCAAGAAGACGTTATAGTTTCACCCAATGGCACATTCACCGCAGGCTTTTATGCTGTTGGAGAAAACGCTTATTGCTTCTCCATATGGTTCACCCAACCTGTAGATAAACATGGCCACAATGCTACCATAGTTTGGATGGCAAACCGTAACCAACCAGTGAATGGAAAACGCTCAAAACTTTCCCTTCTTGACAATGGTAACCTCATCTTAACAGATGCAGGACAGTTCACAGTTTGGACCACAAACACCAACTCATCCAACCCACTTGAGTTGCTTTTGCACGACACTGGAAACCTTGTTCTTCAAGAACAGAACAACGGTTTCATTCTGTGGCAAAGTTTCCATCACCCAACAGATACACTCCTTCCTGATCAACATCTCACAAGGTACATGAAGCTTGTTTCCTCAAGAAGCAAGAGCGACTATTCTTCCGGCTTCTACAAGCTATTCTTTGACAACGACAATGTTCTTCGTCTTCTTTATGATGGTCCTCAAGTTTCTAGTATTTATTGGCCAGATCCTTGGCTTGTAATTTGGGAAGCTAGTAGATCCACTTACAACGGCAGCAGAGTTGCAGCACTTGATCGTTTGGGGAAGTTCCATTCGTCTGATGATTTCACTCTTAGGACATCTGACTATGGGACAGTGATCCCACGAAGACTAACGCTTGATCATGATGGTAATCTTCGTCTATATAGCTGGAAACATGGACAAGATAAGTGGTCAATATCAGGGCAAGCCAAGCAACAACCTTGCAAGATTCATGGAATTTGTGGACCCAATAGTATTTGCAGTGTTGATCCAAGTGCTGGTAGTAGGTGTAGGTGTCTTCCAGGCTATAGCAGGGTCAACAATCAAGATTGGTCTCAAGGGTGTAAACCAAACTTCCAACTACCCTGCAACAACACCACCGAGTCTCGCTTCTTATTCCTACCCCATGTGGCGTTTTATGGATATGACTATGTATACCATGCAAATTACACCTTTGAACAATGTACGCATTTGTGTTTGCGATTGTGTAAATGCGTAGGCTTCCAGTACTACCCTTTTGAGCCCGCTAGTGTCTTTAGATGTTACATAAAGTCACAGTTACGAAATGGGTATCAAACATTAGATTTCACCGGATCAAGCTTCTTGCGATTGCCGAAAAGCAGTACTTTTTCCAATGAGAACCCCATCAAAGATAATGGCTTGGTATGTTCAGGAAATAGAACTCAACTTGAAAGACCATACACGAAAGGTAAAGAAAATGGATCAGTGAAGTTCATGCTTTGGTTTGCGAGTGGCTTGGGAGGAATTGAGGTAGTGTGCATATTTCTGGTTTGGTGTTTCTTAATTAGAAATGGGAAACACTTGGGTTCAGACACACAGGGCTATGTTCTTGCAGCAGCAACAGGATTCAGGAGATTCAGTTACTCTGAACTGAAACAAGCCACAAAAGGTTTCAGTAAAGGGATTGGAAGGGGAGCTGGTGGAATTGTCTATAAGGGTCTGTTATCAGATAATAGAGTTGTGGCAATAAAGCAACTATATGAGGCAAACCAAGGAGAAAGTGAGTTCTTAGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAACTTAATTAGCATGTGGGGTTATTGTGCAGAGGGAAAGCACAGGTTGCTGGTGTATGAGTACATGAAAAATGGTTCTTTAGCGGAAAACTTCTCGTCAAATGCACTTGATTGGGGTCAGAGGTATAGCATTGCTTTGGGTACGGCAAGGGGTCTGGCTTACCTACATGAAGAATGTTTGGAGTGGATTTTGCATTGTGATATCAAGCCGCAAAATATACTTCTTGATTCTGATTTTAAACCCAAGGTTGCGGATTTTGGCCTGTCTAAGCTTGTAAATCGGAACAATCCCAACACTTCAAGCGTCTCAAGGATAAGAGGAACAAGAGGTTACATGGCTCCAGAATGGGTTTTCAACATGTCAATCACTTCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTCTTGGAGATGATAACTGGAAAGAGCCCAATGACAGGCATCCAAAAAGCAGATGGAGTAGACTCACCAAACGAGAGGTTGGTAACATGGGTGAGGGAAAAGAGGAAAGGATCTGAAGTGGAATCTTGGGTGGAAGAAATCATTGACACTGCATTGGTATCAAATTATGACAGAAATAAAATGGAAATTTTGGCTACAGTGGCTTTGGAATGTGTGGAGGAAGACAGAGACTTGAGACCCAGCATGAGACAAATTGTTGAGAGGCTCCAGAGCTATGAACATGATTCTTGA | 2376 | 0.4226 | MSSSILFALLLILPCQYSSSFSLSVEKLQEDVIVSPNGTFTAGFYAVGENAYCFSIWFTQPVDKHGHNATIVWMANRNQPVNGKRSKLSLLDNGNLILTDAGQFTVWTTNTNSSNPLELLLHDTGNLVLQEQNNGFILWQSFHHPTDTLLPDQHLTRYMKLVSSRSKSDYSSGFYKLFFDNDNVLRLLYDGPQVSSIYWPDPWLVIWEASRSTYNGSRVAALDRLGKFHSSDDFTLRTSDYGTVIPRRLTLDHDGNLRLYSWKHGQDKWSISGQAKQQPCKIHGICGPNSICSVDPSAGSRCRCLPGYSRVNNQDWSQGCKPNFQLPCNNTTESRFLFLPHVAFYGYDYVYHANYTFEQCTHLCLRLCKCVGFQYYPFEPASVFRCYIKSQLRNGYQTLDFTGSSFLRLPKSSTFSNENPIKDNGLVCSGNRTQLERPYTKGKENGSVKFMLWFASGLGGIEVVCIFLVWCFLIRNGKHLGSDTQGYVLAAATGFRRFSYSELKQATKGFSKGIGRGAGGIVYKGLLSDNRVVAIKQLYEANQGESEFLAEVSIIGRLNHMNLISMWGYCAEGKHRLLVYEYMKNGSLAENFSSNALDWGQRYSIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDFKPKVADFGLSKLVNRNNPNTSSVSRIRGTRGYMAPEWVFNMSITSKVDVYSYGIVVLEMITGKSPMTGIQKADGVDSPNERLVTWVREKRKGSEVESWVEEIIDTALVSNYDRNKMEILATVALECVEEDRDLRPSMRQIVERLQSYEHDS | 791 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2003g00002 | 791 | FunFam | Putative receptor protein kinase ZmPK1 | 15 | 144 | - | - | |
Gabi2003g00002 | 791 | SUPERFAMILY | Protein kinase-like (PK-like) | 491 | 785 | IPR011009 | - | |
Gabi2003g00002 | 791 | CDD | STKc_IRAK | 514 | 785 | - | - | |
Gabi2003g00002 | 791 | FunFam | S-receptor-like serine/threonine-protein kinase | 478 | 582 | - | - | |
Gabi2003g00002 | 791 | FunFam | Serine/threonine-protein kinase | 583 | 791 | - | - | |
Gabi2003g00002 | 791 | Gene3D | Transferase(Phosphotransferase) domain 1 | 583 | 791 | - | - | |
Gabi2003g00002 | 791 | SMART | serkin_6 | 508 | 788 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi2003g00002 | 791 | CDD | PAN_AP_plant | 324 | 410 | - | - | |
Gabi2003g00002 | 791 | ProSiteProfiles | Bulb-type lectin domain profile. | 18 | 142 | IPR001480 | - | |
Gabi2003g00002 | 791 | ProSiteProfiles | PAN/Apple domain profile. | 328 | 413 | IPR003609 | - | |
Gabi2003g00002 | 791 | CDD | EGF | 279 | 313 | - | - | |
Gabi2003g00002 | 791 | SMART | blect_4 | 24 | 145 | IPR001480 | - | |
Gabi2003g00002 | 791 | ProSiteProfiles | Protein kinase domain profile. | 508 | 791 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi2003g00002 | 791 | CDD | B_lectin | 33 | 145 | IPR001480 | - | |
Gabi2003g00002 | 791 | Gene3D | Phosphorylase Kinase; domain 1 | 477 | 582 | - | - | |
Gabi2003g00002 | 791 | Gene3D | - | 146 | 273 | IPR036426 | - | |
Gabi2003g00002 | 791 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 71 | 163 | IPR036426 | - | |
Gabi2003g00002 | 791 | PIRSF | SRK | 1 | 790 | IPR024171 | GO:0004674 | |
Gabi2003g00002 | 791 | ProSitePatterns | Protein kinases ATP-binding region signature. | 514 | 536 | IPR017441 | GO:0005524 | |
Gabi2003g00002 | 791 | Pfam | S-locus glycoprotein domain | 245 | 310 | IPR000858 | GO:0048544 | |
Gabi2003g00002 | 791 | Pfam | Protein kinase domain | 512 | 782 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi2003g00002 | 791 | PANTHER | OS07G0415500 PROTEIN | 4 | 788 | - | - | |
Gabi2003g00002 | 791 | FunFam | Serine/threonine-protein kinase | 146 | 273 | - | - | |
Gabi2003g00002 | 791 | Pfam | D-mannose binding lectin | 70 | 158 | IPR001480 | - | |
Gabi2003g00002 | 791 | ProSiteProfiles | EGF-like domain profile. | 276 | 314 | IPR000742 | - | |
Gabi2003g00002 | 791 | Gene3D | - | 23 | 144 | IPR036426 | - | |
Gabi2003g00002 | 791 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 624 | 636 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2003g00002 | Gabi-Chr2003 | 20601 | 22976 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2003g00002 | 498 | 788 | Trihelix Transcription Factor Family | AT5G38560 | 42.761 | 2.05e-67 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Gabi2003g00002 | Pkinase | 6e-53 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2003g00002 | - | - | gmx:100806357 | 1053.12 |