Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2001g00028 ATGACTACTTGCCTTTCTCGCAAGTACACTCGTTTAGGTTCATCTAAGCAAATGGCCGAGCAAATTGCCTTTTCAGGAATTTTAAGTAACAAGCAACAGTTTAATCCAGATTTCTATAATTGGAATAGAATCAAGGTTAGGTATTGTGATGGGGCATCATTTACTGGTGATATGGAAGCAGTCAATCCAGCAACTAAGTTGCACTTCAGAGGAGCAAGGATTTTTGCTGCTCTCATGGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCAAAATGCTATTATCTCTGGATGTTCAGCTGGAGGATTGACTTCAATACTGCATTGTGATCGCTTTCGAGCTCTATTACCTGCAGGAGCTAAAGTAAAATGCCTCTCAGATGCTGGTTACTTTATCAATGCAAAGGATGTCTCAGGAGAACAACACATTGAACAGTACTTCAGTCAAATTGTTACCACACATGGCTCTGCTAGGAATTTGCCACAATCATGCACTTCAAGACTCAGCCCAGGCCTGTGCTTTTTCCCACAATATTTGGTATCACAAATCACTACACCAATCTTCTTTGTAAATGCAGCATACGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTCATGGCAACTGGCATAGCTGCAAGCTTGACATAAGCAACTGCTCACCTAATCAACTCGGTCTAATGCAAGGCTTCAGGACAGAATTCTTAAGGGCATTGACTGTGCTAGGAAACTCTCCAATTAATGGAATGTTTATAGACTCTTGCTATGCACACTGCCAAACTGAAATGCAGGAAACATGGTTCAGAAGTGACTCTCCGCAGCTAGCCCACACAACAATTGCAAAGGCTGTAGCAGATTGGTTTTATGAAAGAAGGCCTTTCCATCATATAGATTGCCCTTACCCTTGCAATCCAAGTTGTCCCATCCCCATTATTGATCCACAAGACCACCCAGGAAAAAACATGACCACCAAAGGAACGTCGGATGCATCAGCTAGAAAGCCCAGTTTTCCAAAACTATCAAACAAGGAACAGTGGATTGAGCTTTTGTGCATTGAACATGGGATCAGCGGGCTTCTATTAACGTTGGTTACTCTGGTCATACTATAA 1122 0.4216 MTTCLSRKYTRLGSSKQMAEQIAFSGILSNKQQFNPDFYNWNRIKVRYCDGASFTGDMEAVNPATKLHFRGARIFAALMEDLLAKGMKNAQNAIISGCSAGGLTSILHCDRFRALLPAGAKVKCLSDAGYFINAKDVSGEQHIEQYFSQIVTTHGSARNLPQSCTSRLSPGLCFFPQYLVSQITTPIFFVNAAYDSWQIKNILAPGVADPHGNWHSCKLDISNCSPNQLGLMQGFRTEFLRALTVLGNSPINGMFIDSCYAHCQTEMQETWFRSDSPQLAHTTIAKAVADWFYERRPFHHIDCPYPCNPSCPIPIIDPQDHPGKNMTTKGTSDASARKPSFPKLSNKEQWIELLCIEHGISGLLLTLVTLVIL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2001g00028 373 MobiDBLite consensus disorder prediction 319 341 - -
Gabi2001g00028 373 PANTHER NOTUM-RELATED 2 312 IPR004963 GO:0016787
Gabi2001g00028 373 MobiDBLite consensus disorder prediction 324 339 - -
Gabi2001g00028 373 Pfam Pectinacetylesterase 2 296 IPR004963 GO:0016787
Gabi2001g00028 373 SUPERFAMILY alpha/beta-Hydrolases 68 197 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2001g00028 Gabi-Chr2001 176898 184138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2001g00028 1 322 Carbohydrate Esterase AT4G19420 61.625 1.15e-167 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2001g00028 K19882 - gmx:100776478 652.899