Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2001g00027 ATGAATTTGTGCAGAATGGAAAGCAAAAGAAGAGGCCAATGGTTAAACCTTGTAGTATGTGCACTGCTATTGCTGAAGGCAGAAGCTGTTTATGTACCAATCACTTATGTCCAGAACGCGGTAACAAAAGGAGCCGTTTGTTTGGATGGGAGTCCTGCGGCTTACCATTTAGATAAGGGATTTGGAGCAGGGATTAAAAATTGGTTAGTTCAATTTGAGGGAGGAGGATGGTGCAACAATATGACTACTTGCCTTTCTCGCAAGTACACTCGTTTAGGTTCATCTAAGCAAATGGCCGAGCAAATTGCCTTTTCAGGAATTTTAAGTAACAAGCAACAGTTTAATCCAGATTTCTATAATTGGAATAGAATCAAGGTTAGGTATTGTGATGGGGCATCATTTACTGGTGATATGGAAGCAGTCAATCCAGCAACTAAGTTGCACTTCAGAGGAGCAAGGATTTTTGCTGCTCTCATGGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCAAAATGCTATTATCTCTGGATGTTCAGCTGGAGGATTGACTTCAATACTGCATTGTGATCGCTTTCGAGCTCTATTACCTGCAGGAGCTAAAGTAAAATGCCTCTCAGATGCTGGTTACTTTATCAATGCAAAGGATGTCTCAGGAGAACAACACATTGAACAGTACTTCAGTCAAATTGTTACCACACATGGCTCTGCTAGGAATTTGCCACAATCATGCACTTCAAGACTCAGCCCAGGCCTGTGCTTTTTCCCACAATATTTGGTATCACAAATCACTACACCAATCTTCTTTGTAAATGCAGCATACGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTCATGGCAACTGGCATAGCTGCAAGCTTGACATAAGCAACTGCTCACCTAATCAACTCGGTCTAATGCAAGGCTTCAGGACAGAATTCTTAAGGGCATTGACTGTGCTAGGAAACTCTCCAATTAATGGAATGTTTATAGACTCTTGCTATGCACACTGCCAAACTGAAATGCAGGAAACATGGTTCAGAAGTGACTCTCCGCAGCTAGCCCACACAACAATTGCAAAGGCTGTAGCAGATTGGTTTTATGAAAGAAGGCCTTTCCATCATATAGATTGCCCTTACCCTTGCAATCCAAGTTGTCCCATCCCCATTATTGATCCACAAGACCACCCAGGAAAAAACATGACCACCAAAGGAACGTCGGATGCATCAGCTAGAAAGCCCAGTTTTCCAAAACTATCAAACAAGGAACAGTGGATTGAGCTTTTGTGCATTGAACATGGGATCAGCGGGCTTCTATTAACGTTGGTTACTCTGGTCATACTATAA 1362 0.4222 MNLCRMESKRRGQWLNLVVCALLLLKAEAVYVPITYVQNAVTKGAVCLDGSPAAYHLDKGFGAGIKNWLVQFEGGGWCNNMTTCLSRKYTRLGSSKQMAEQIAFSGILSNKQQFNPDFYNWNRIKVRYCDGASFTGDMEAVNPATKLHFRGARIFAALMEDLLAKGMKNAQNAIISGCSAGGLTSILHCDRFRALLPAGAKVKCLSDAGYFINAKDVSGEQHIEQYFSQIVTTHGSARNLPQSCTSRLSPGLCFFPQYLVSQITTPIFFVNAAYDSWQIKNILAPGVADPHGNWHSCKLDISNCSPNQLGLMQGFRTEFLRALTVLGNSPINGMFIDSCYAHCQTEMQETWFRSDSPQLAHTTIAKAVADWFYERRPFHHIDCPYPCNPSCPIPIIDPQDHPGKNMTTKGTSDASARKPSFPKLSNKEQWIELLCIEHGISGLLLTLVTLVIL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2001g00027 453 MobiDBLite consensus disorder prediction 404 419 - -
Gabi2001g00027 453 SUPERFAMILY alpha/beta-Hydrolases 148 277 IPR029058 -
Gabi2001g00027 453 PANTHER NOTUM-RELATED 16 392 IPR004963 GO:0016787
Gabi2001g00027 453 Pfam Pectinacetylesterase 26 376 IPR004963 GO:0016787
Gabi2001g00027 453 MobiDBLite consensus disorder prediction 399 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2001g00027 Gabi-Chr2001 176898 184138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2001g00027 13 402 Carbohydrate Esterase AT4G19420 62.118 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2001g00027 K19882 - gmx:100776478 768.844