Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2001g00022 ATGTCAGACATTCTCAGGGAAGTTGGGTCTCCGGAGTATGGGAAATTTGAAGTCAAGTTCAGTAGGAAAAGTATTGTAAAAGCTGCCAATCCTTTACCAGAGCCATTTTCAATCACTCTCTCAAATCTTGATCTACTTTCAGGCCGTTTTCCTGTTACATACTTATATTTCTACCTCAGACCAAAATTAGGTAACTATAAAGCTTTTGTTGAGGCTCTTAAGAGCTCTTTGGCACAAGTACTTAATTACTACTATCCCTTTGCTGGCCAAATTGTTCAAAATCCCAAAACCAGTGAACCTGAAATCATATGTGACAACAATGGTGCTCTGGTGATTGAAGCTCATGCATATACCCCATTAAAGAATTTAGATTTTTATAATCTCAATGAAACTCTTCAAGAAAAGATAGTCTCCGTTCAACCAGACTTCCCCTTGCAAATTCAGGTAACAGACTACCCTTGTGGAGGCATTTCCATTGCATTTACTTTTGACCATGCATTAGGTGATGCAACTTCCTTTGGTAAATTTATTTCTTCATGGTGTGAAATAGCTCAAAATAAACCACTATCATGCCAACCAGACCATACTAGACACCTTTGTGCACGTTCTCCTCCCAAATATGAACCATCCTTAGACCAAACTTTTATCAAGTGCACCATGGAAGAGATACAGAACATGCCAATGAAACACATCTCACTTAAACGCCTTTATCATATCAATGCATCAAGCATTAACATGCTGCAGAGACTTGCATCTGTTGGTGGCACCAAGAGAACAAAGATCGAGGCTTTCTCTGCCTATGTATGGAGGATAATGATTGGCACCATTGATCAAAGCCATGAAAAGTGCAAGATGGGTTGGTTGGTGGATGGAAGAGAAAGAATGGGAACAGGTAAGAATACCATGTCAAATTACATTGGTAATGTCCTATCTTTGGCTTTTGGGGAGGCAAGTATTCAAGAATTGAAAAAAGCCTCTATATCAGACACTGCTAACATAGTGCATGAGGCAATTTCAAAGGTTAAGAATGAGGCTCATTTCTTGGATTTGATTGATTGGGTTGAGTGTCATAGGCCTGGTTTGATGCTAGCAAAGGCAGTATTGGGTCAGGAGGGACCAGTCCTGGTAGTGTCCTCAGGTAGAAGGTTTCCTGTCACTGAAGTTGACTTTGGATTTGGGACACCCTTGTTAGGGACAGTTTACACTTCCATTGAAAAGATAGGAGTTGGTTACATGAACCAAAGGCCAAGTGCTAAAGGTGATGGTTCGTGGACTGTGTCTGCTATCTTGTGGCCTGAACTGGCTTCTGCACTCAAGGATGACCCAATTTTTCAGCCCATGTCTGCTGCTAATCTTCAACTTTAG 1365 0.4088 MSDILREVGSPEYGKFEVKFSRKSIVKAANPLPEPFSITLSNLDLLSGRFPVTYLYFYLRPKLGNYKAFVEALKSSLAQVLNYYYPFAGQIVQNPKTSEPEIICDNNGALVIEAHAYTPLKNLDFYNLNETLQEKIVSVQPDFPLQIQVTDYPCGGISIAFTFDHALGDATSFGKFISSWCEIAQNKPLSCQPDHTRHLCARSPPKYEPSLDQTFIKCTMEEIQNMPMKHISLKRLYHINASSINMLQRLASVGGTKRTKIEAFSAYVWRIMIGTIDQSHEKCKMGWLVDGRERMGTGKNTMSNYIGNVLSLAFGEASIQELKKASISDTANIVHEAISKVKNEAHFLDLIDWVECHRPGLMLAKAVLGQEGPVLVVSSGRRFPVTEVDFGFGTPLLGTVYTSIEKIGVGYMNQRPSAKGDGSWTVSAILWPELASALKDDPIFQPMSAANLQL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2001g00022 454 Pfam Transferase family 17 441 - -
Gabi2001g00022 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 35 403 - -
Gabi2001g00022 454 Gene3D - 217 440 IPR023213 -
Gabi2001g00022 454 Gene3D - 13 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2001g00022 Gabi-Chr2001 137739 139103 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2001g00022 41 433 Monolignol Biosynthesis Gene Families AT5G48930 25.180 2.09e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2001g00022 - - gmx:100795616 763.451