Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2001g00020 ATGGCGGGGCAATCAAGGAAGTGGATGATATTGTTGGCAACAATATGGATACAAGCATTCACTGGCACCAATTTTGATTTCTCAGAGTACTCTTCAGCTATGAAATCAGTACTCAACATCTCACAGGTGCAACTCAACTACCTTGCCACAGCCAGTGACATGGGCAAGTTCTTTGGATGGTCCTCTGGTCTTGCTCTCATGTATCTTCCTCTCTCTGCTGTCATGTTCATCTCTGCTTCCATGGGCTTCATCGGCTATGGCCTCCAATGGCTTGTCATCAAGCAACTCATCACTTTGCCTTATTTTCTGATCTTTCTTCTGTGTCTTTTGAGTGGCTGCAGCATCTGTTGGTTCAACACAGTTTGTTTTGTTCTCTGCATTAAGAATTTCCCAGTTAACAGAGCCCTTGCATTGTCACTCACTGTGAGTTTCAATGGTGTAAGTGCTGCACTCTACACACTTGCTGCAAATTCAATAGACCCTTCATCTGATACAGTGTATCTGCTTTTGAATGCCATTGTTCCACTTCTCACTTCCCTTGCAGCACTAATCCCAATTCTTCGCCAACCACCTTTAGATTCTCTTTCTCCTGATGCAGCTCGTAGGAACTCAGTGATATTTCTTATATACAACATCTTAGCCATTTTCACTGGCCTTTATCTCCTTCTCTTTGGTTCCTCAACTTCTGATGCAGCCACGGCACGCCTCTACTTTGGTGGAGCTATTTTTCTTCTCATCTGTCCATTATGTTTACCTGGAATTATATATGCTCGAAATTGGTTTCTCCATGTTATCCATTCCAGCTTTCAGATGGAAGGTTCTGGCTTCATTCTTGTTCATGTTAATGATCTTGAAAGTCACAGGACAAAAAGTAGTGATGGATGTTGTCAAAGCATGCTTGGACAGGATCAGTTGGCAATGCTGGGAGAAGAACACACAGCTGCAGATATTGTAGGAAGGTTGGATTTTTGGCTTTATTATGTTGCATACTTCTGTGGAGGTACGATTGGTCTTGTTTACAGCAATAATCTTGGACAGATAGCTCAATCTTTAGGCATGAGTTCAAGGACTTCTACCCTTGTCACTCTATACTCATCCTTCTCCTTCTTTGGTCGCTTGTTTTCAGCTGTACCAGACTATATTCGAAATAAGTTCTACTTTGCAAGGACTGGATGGCTAACCATTGCACTTATACCAACCCCAATTGCGTTCCTCATTCTTGCTGCATCAGACAGTGCTGTGGCACTTAATACAGGCACTGCACTAATTGGTTTCAGCTCTGGTTTCATATTTGCTGCTGCTGTGGCTGTCACATCTGAGCTGTTTGGACCTAACAATGTGAGCGTCAACCACAACATTCTCATAACAAATATCCCAATTGGATCGCTTCTCTATGGACTTCTAGCTGCAGTAGTTTATGATGCCAATGCTAACTCAACAAAGCCAGGAAACTTCATGTCTGACTCACTAGTGTGCATGGGAAGGCAGTGCTACTTCTGGACTTTTGTGTGGTGGGGATGTATATCTGTCATTGGACTAGCTTCTAGTGTGCTGTTGTTCTTAAGAACCAAACATGCATACGATCGTTTTGAGAGACACCGTCTTTCAGCAAGATCAGATCTGTCTTAA 1629 0.4291 MAGQSRKWMILLATIWIQAFTGTNFDFSEYSSAMKSVLNISQVQLNYLATASDMGKFFGWSSGLALMYLPLSAVMFISASMGFIGYGLQWLVIKQLITLPYFLIFLLCLLSGCSICWFNTVCFVLCIKNFPVNRALALSLTVSFNGVSAALYTLAANSIDPSSDTVYLLLNAIVPLLTSLAALIPILRQPPLDSLSPDAARRNSVIFLIYNILAIFTGLYLLLFGSSTSDAATARLYFGGAIFLLICPLCLPGIIYARNWFLHVIHSSFQMEGSGFILVHVNDLESHRTKSSDGCCQSMLGQDQLAMLGEEHTAADIVGRLDFWLYYVAYFCGGTIGLVYSNNLGQIAQSLGMSSRTSTLVTLYSSFSFFGRLFSAVPDYIRNKFYFARTGWLTIALIPTPIAFLILAASDSAVALNTGTALIGFSSGFIFAAAVAVTSELFGPNNVSVNHNILITNIPIGSLLYGLLAAVVYDANANSTKPGNFMSDSLVCMGRQCYFWTFVWWGCISVIGLASSVLLFLRTKHAYDRFERHRLSARSDLS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2001g00020 542 Gene3D MFS general substrate transporter like domains 323 539 IPR036259 -
Gabi2001g00020 542 SUPERFAMILY MFS general substrate transporter 6 525 IPR036259 -
Gabi2001g00020 542 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 528 - -
Gabi2001g00020 542 Pfam Nodulin-like 7 252 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2001g00020 Gabi-Chr2001 122846 126775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2001g00020 1 539 Nodulin-like Gene Family AT1G31470 60.110 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2001g00020 - - gmx:100814771 885.174