Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2001g00008 ATGGGATTGTGGTTCTATTTTCTATCTTCTATTTCTCTATACCTTTTCCTTCAAGCTTTTCTCAATGTCATCCGCAACAAGAGACTACCACCAAGCCCTCCTACCATACCCTTATTAGGTAACATTTTCTGGCTCCTTAAGTCGTCAAAAAATTTTGCTGTCCTCGAACCTGTCCTTCGATCTTTACGTTCCAAGTATGGCAACATTGTTACCATTCACATTGGGACTACACCTTCCATTTTCATAACATCCCACGAAGCTGCTCATCGAACACTTGTTAAAAATGGCACTGTCTTTGCTAGTCGCCCCTCAGCTCTTCAAACCATCAAAGTCTTCTTCCCTAATCTATACACCGTTAGTACTTCTCCTTATGGTCCCATTTGGCGGTTTTTACGTCAAAACGTCATGCAAGTTATTCAACCTTCTCGATTAAATTCATATTCTCATTGCCGTAAGTTGGCGTTAAATGTATTCAAGAAACATCTTTTAGCTGATATTGAATCAGGCAATAATAAGGGCATACCAATTTATGATCATTTTAATTACACAATGTATGTTTTACTTTCTTATATGTGTTTTGGAGATAAACTTGATGAGAAAACTGTTGAGAATATTCAAAGGGTACAACATAGTTTACTTCACAATTTCATTCGGTTCAATGTCCTGAATTTTCTACCAGTCTTTTTAACCAAGATTTTGTTTAGAAGACTATGGAGAAAGATCTTGGAAATTCGTCAAAGTCAAGTGAGTGTCTTCCTCCCTATATTAAAAGCACGACATGAGAAAATGAAAAGCAAGGTTGGTGTTGGTGTTGGAAACGAAGTAGAAACAGAGTTTGAGGCTTATGTTGATACCCTTTTTGATATGAAACTCCCAGATAGTGGAAGCAAGCTAAAGGATGAAGAGTTGGTGAGTTTGTGTGCTGAGTTTATCTTAGGCGGCACTGACACAACAGCTACCACGTGGTTGTGGGCCATGGCAAATTTAGTGAAGCATCAAAACGTACAAGAGAAACTCTTTGATGAAATTAAGAAAGTTGTGAAACATGGTGAAGACATTGAAGAGGAACATTTGAAAAGGATGCCTTATTTGAAGGCTGTGGTGTTAGAGACCCTGCGGCGACATCCACCAGGTCACTTTATATTGCCTAGGGCAGTGACGCAAGACACTGTGATAGATGGTTATGATATACCTAAAAATGCAATGGTGAATTTTCTTGTGGCTGAAATGGGGTGGGATCCAAATGTGTGGGAAGATCCAATGGAGTTTAAGCCTGAAAGGTTTTTGAGGCATTGTGAAGGTGATACTAAATTTGATCTAAAAGGGTTTGCGGAGATTAAAATGATGCCTTTTGGTGCTGGAAGGAGAGTTTGCCCAGCAATTAGTATGGCACTGCTGCACCTTGAGTACTTTGTGGCCAATTTGGTAAGGGATTTTAAATGGACACTTGAAGATGGGTGTGAGGTTGACTTGAGTGAGAATCAGGCTTTCACTATTGTGATGAAGAATCCGTTGAGACCATGTGTGTCTCCAAGAATCACTTGA 1545 0.3948 MGLWFYFLSSISLYLFLQAFLNVIRNKRLPPSPPTIPLLGNIFWLLKSSKNFAVLEPVLRSLRSKYGNIVTIHIGTTPSIFITSHEAAHRTLVKNGTVFASRPSALQTIKVFFPNLYTVSTSPYGPIWRFLRQNVMQVIQPSRLNSYSHCRKLALNVFKKHLLADIESGNNKGIPIYDHFNYTMYVLLSYMCFGDKLDEKTVENIQRVQHSLLHNFIRFNVLNFLPVFLTKILFRRLWRKILEIRQSQVSVFLPILKARHEKMKSKVGVGVGNEVETEFEAYVDTLFDMKLPDSGSKLKDEELVSLCAEFILGGTDTTATTWLWAMANLVKHQNVQEKLFDEIKKVVKHGEDIEEEHLKRMPYLKAVVLETLRRHPPGHFILPRAVTQDTVIDGYDIPKNAMVNFLVAEMGWDPNVWEDPMEFKPERFLRHCEGDTKFDLKGFAEIKMMPFGAGRRVCPAISMALLHLEYFVANLVRDFKWTLEDGCEVDLSENQAFTIVMKNPLRPCVSPRIT 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2001g00008 514 Gene3D Cytochrome P450 23 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 SUPERFAMILY Cytochrome P450 30 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 Pfam Cytochrome P450 30 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 CDD CYP77_89 65 506 - -
Gabi2001g00008 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 505 - -
Gabi2001g00008 514 FunFam Cytochrome P450 family protein 23 514 - -
Gabi2001g00008 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Gabi2001g00008 514 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2001g00008 514 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2001g00008 Gabi-Chr2001 50078 51622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2001g00008 1 512 Cytochrome P450 AT1G64940 44.742 2.87e-161 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2001g00008 K24184 - gmx:102660230 817.379