Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi19g00007 ATGTCTAGCTCCAGCAGAAAGAAGCTTCTTTTGAACACCGTGTCTGTGAAACTAGGCTGCGGCAGCTGCAGAAGGCCAAAACTGTGTCGCATTTTCCATCCAAAGCCAAAACCCAAGAACCCCACTTACCAAAAGAACAAACTTTACAACCATTCTTCCTGTTCACGCACGTGGGGTGAGGACAAATACGACAGTGCCAGCACCTCCAACACTACTGCCACGACATTCTCTCCCTGCTACGTTGATTCCTCACAGTTTTCTGACTCAGAGAACAACGCGAAGGCCCCCAAGACATTAGGAGGTTTCGGCAAAGCTGGCAAAGAAGGGGTGGCGGTGGAGAAAGATTCTGAAGACCCTTATCTGGATTTCAAGCAGTCCATGCTGCAAATGATATTAGAGAACGAGATATACTCTAAGGACGATCTCAGGGAGCTTCTGAACTGTTTTCTTCAGCTGAATTCCCCTTATCATCATGGTGTTATAGTTAGAGCTTTCACTGAGATCTGGAATGGGGTCTTCTCTGTGAGGTCCAATTCACCCAGGTTTCACATCACCCGTAAGCCACGTGAGTTCTAA 576 0.474 MSSSSRKKLLLNTVSVKLGCGSCRRPKLCRIFHPKPKPKNPTYQKNKLYNHSSCSRTWGEDKYDSASTSNTTATTFSPCYVDSSQFSDSENNAKAPKTLGGFGKAGKEGVAVEKDSEDPYLDFKQSMLQMILENEIYSKDDLRELLNCFLQLNSPYHHGVIVRAFTEIWNGVFSVRSNSPRFHITRKPREF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi19g00007 191 ProSiteProfiles OVATE domain profile. 112 171 IPR006458 -
Gabi19g00007 191 NCBIfam uncharacterized plant-specific domain TIGR01568 110 170 IPR006458 -
Gabi19g00007 191 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 174 IPR038933 GO:0045892
Gabi19g00007 191 Pfam Transcriptional repressor, ovate 116 172 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi19g00007 Gabi-Chr19 85142 85840 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi19g00007 Ovate 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi19g00007 - - mtr:25499452 272.322