Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi19g00006 ATGGGCAAGAAAAAAATGAAGCTCCTTTCTCTTCTTAAGAACACACAAGTTCTGTCTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTGGCCTTGGCCATCTTGTCACCAACCTAGAACCCTCTCTTTTAGAGCCAAAGATGACACATTCAAAACTATTAACTCAGCCTACTTGGATGCCACCATGGACATCTTGGAGAGCTCTGAATCATTTTTCACCGTTTCTCCCAAGTCTGATAGCTTCTCAATGGCATCTGAGGAATCCATAAAAGAGGATTCAATTGAGACTGTGATTCGTGGGTTGCGTTCTGAGAGGCTTTTCTTCGAGCCAGATGAGACCAGCTCTATATTAGAGGCTAAAGTAACAAGCTTGCCATTCAAAGACAGTGTGGTTTTATCCATGGAATCTCAAGACCCTTATGTTGATTTTCGAAAGTCCATGGAGGAGATGGTAGCGGCTCAGGGTGTGAAAGATTGGGAGGGTCTTCAGGAGCTTTTATGTTGGTATTTGAGGGTCAATGGGAAAATCAATCATGGCTATATTGTTGGTGCTTTTGTTGATTTATTGGTTGGTCTTGCATTTGCTTTAGGTTCATCATCATCATCTTCTTCTTCTTCCCATTCTCCTTCTTCTCCTTTATCGTTTCATAGTTCTTCTCTGTCTTCTTGCAGCACTCGGTGTGTTTCTTGTTTGGAAGCTGAGGTTCGTACTCCTAGTTCATCTTTGTTGTTAGAACATGTTAGGAAGGGGATTAAACACAAAGATGAGGCTTCATCTTCGTCTTCAAATACTTGA 795 0.4151 MGKKKMKLLSLLKNTQVLSLSSSSSSSSSWPWPSCHQPRTLSFRAKDDTFKTINSAYLDATMDILESSESFFTVSPKSDSFSMASEESIKEDSIETVIRGLRSERLFFEPDETSSILEAKVTSLPFKDSVVLSMESQDPYVDFRKSMEEMVAAQGVKDWEGLQELLCWYLRVNGKINHGYIVGAFVDLLVGLAFALGSSSSSSSSSHSPSSPLSFHSSSLSSCSTRCVSCLEAEVRTPSSSLLLEHVRKGIKHKDEASSSSSNT 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi19g00006 264 ProSiteProfiles OVATE domain profile. 132 191 IPR006458 -
Gabi19g00006 264 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 46 192 IPR038933 GO:0045892
Gabi19g00006 264 NCBIfam uncharacterized plant-specific domain TIGR01568 130 193 IPR006458 -
Gabi19g00006 264 Pfam Transcriptional repressor, ovate 136 192 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi19g00006 Gabi-Chr19 67622 68416 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi19g00006 Ovate 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi19g00006 - - qsa:O6P43_006008 281.567