Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi199g00009 ATGGCTTCTTCAATTAGGATCTCAAGGCTGCTATCTCGTTCTTTTGTTTCTGCTTCCACTACTTCTGTGTTTTCTAGAGGTGGGAGTGGTTACCTAGGTACAGGGCTCAGTAAATACAGCACTGCTTCTGCCATTGAAGAACCAATTGAACCATCAGTTAAAGTACAACACACCCAGCTCTTAATTGAAGGAAAATTTGTGGATGCAGCTTCTGGCAAAACTTTTCCAACGTTGGACCCCAGGACAGGAGAAGTGATTTCTCATGTTGCTGAGGGTGACCATGAAGATGTTGATCGTGCTGTTGCAGCTGCACGCAAAGCATTCGATCATGGACCTTGGCCAAAGATGACAGCCTATGAAAGACAAAAGGTATTATTGCGTGCTGCTGATCTGTTTGAAAAGCATAATGATGAGCTTGCTGCACTTGAGACTTGGGATAATGGGAAGCCATATGCACAATCTGCTCAAATTGAAATTCCAATGCTGGTTCGCCTGTTTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGACCATATCATGTGCAAACATTGCATGAACCCATTGGTGTTGCGGGTCAAATCATTCCATGGAACTTCCCACTTCTCATGTTTGCCTGGAAGGTTGGCCCAGCATTGGCCTGTGGTAACACTATTGTTCTGAAAACAGCTGAGCAGACACCATTATCTGCTTTATATGCAACTAAGTTACTTCATGAGGCTGGGCTTCCTCCTGGTGTTTTAAATATAATATCTGGCTTTGGTCCAACTGCTGGTGCTGCTCTTGCTAGTCACATGGATGTAGATAAGATTGCTTTTACAGGTTCAACTAGTACCGGAAAAATTGTCCTTGAACTTGCTGCAAAGAGCAATCTTAAGGCTGTAACTTTGGAGCTTGGTGGGAAATCCCCTTTTATTGTATGCGAAGATGCTGATATAGATCAGGCTGTTGAGCTAGCACACTTTGCATTGTTCTTTAATCAGGGACAATGCTGCTGTGCTGGGTCTCGAACATTTGTACATGAACGTGTGTACGATGAGTTTATTGAGAAAGCAAAGGCACGTGCTTTGAAGCGTACTGTTGGTGATCCATTCAAAGAGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTGAGAAAATACTGAAGTACATTAGATCCGGTGTTGAAAGTGGAGCTACCCTTGAAACTGGAGGGGAGAGATTTGGCAACAAGGGCTTCTATGTTCAGCCTACTGTGTTCTCAAATGTTCAGGATGGCATGCTGATTGCAAAGGATGAGATATTCGGGCCAGTGCAATCCATATTAAAATTCAATGATATTGGTGAGGTGATTCGTAGAGCAAATGCCACACGCTATGGTCTTGCAGCAGGGGTGTTTACAAAGGACATTGACACTGCAAACACATTGACTCGAGCATTGAGAGCAGGAACAGTGTGGGTGAACTGCTTCGATACATTTGATGCAGCAATTCCTTTTGGAGGGTATAAGATGAGTGGACAGGGAAGAGAAAAAGGAGAATACAGTCTTAAGAACTACTTGCAAGTGAAGGCTGTTGTTACACCCTTGAAGAACCCAGCATGGCTTTGA 1617 0.4378 MASSIRISRLLSRSFVSASTTSVFSRGGSGYLGTGLSKYSTASAIEEPIEPSVKVQHTQLLIEGKFVDAASGKTFPTLDPRTGEVISHVAEGDHEDVDRAVAAARKAFDHGPWPKMTAYERQKVLLRAADLFEKHNDELAALETWDNGKPYAQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYATKLLHEAGLPPGVLNIISGFGPTAGAALASHMDVDKIAFTGSTSTGKIVLELAAKSNLKAVTLELGGKSPFIVCEDADIDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFIEKAKARALKRTVGDPFKEGIEQGPQIDSEQFEKILKYIRSGVESGATLETGGERFGNKGFYVQPTVFSNVQDGMLIAKDEIFGPVQSILKFNDIGEVIRRANATRYGLAAGVFTKDIDTANTLTRALRAGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi199g00009 538 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 62 334 - -
Gabi199g00009 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Gabi199g00009 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 499 IPR016163 GO:0016620
Gabi199g00009 538 FunFam Mitochondrial aldehyde dehydrogenase 2 310 499 - -
Gabi199g00009 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 43 528 - -
Gabi199g00009 538 CDD ALDH_F2BC 55 530 - -
Gabi199g00009 538 Pfam Aldehyde dehydrogenase family 66 528 IPR015590 GO:0016491
Gabi199g00009 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
Gabi199g00009 538 SUPERFAMILY ALDH-like 53 532 IPR016161 GO:0016491
Gabi199g00009 538 FunFam Aldehyde dehydrogenase, putative 500 526 - -
Gabi199g00009 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 72 528 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi199g00009 Gabi-Chr199 91522 96030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi199g00009 6 538 Aldehyde Dehydrogenase Gene Family AT3G48000 78.090 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi199g00009 K00128 - gmx:100786773 979.548