Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi199g00008 ATGGCTTCTTCAATTAGGATCTCAAGGCTGCTATCTCGTTCTTTTGTTTCTGCTTCCACTACTTCTGTGTTTTCTAGAGGTACTTTTAAATACAGCACTGCTTCTGCCATTGAAGAACCAATTGAACCATCAGTTAAAGTACAACACACCCAGCTCTTAATTGAAGGAAAATTTGTGGATGCAGCTTCTGGCAAAACTTTTCCAACGTTGGACCCCAGGACAGGAGAAGTGATTTCTCATGTTGCTGAGGGTGACCATGAAGATGTTGATCGTGCTGTTGCAGCTGCACGCAAAGCATTCGATCATGGACCTTGGCCAAAGATGACAGCCTATGAAAGACAAAAGGTATTATTGCGTGCTGCTGATCTGTTTGAAAAGCATAATGATGAGCTTGCTGCACTTGAGACTTGGGATAATGGGAAGCCATATGCACAATCTGCTCAAATTGAAATTCCAATGCTGGTTCGCCTGTTTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGACCATATCATGTGCAAACATTGCATGAACCCATTGGTGTTGCGGGTCAAATCATTCCATGGAACTTCCCACTTCTCATGTTTGCCTGGAAGGTTGGCCCAGCATTGGCCTGTGGTAACACTATTGTTCTGAAAACAGCTGAGCAGACACCATTATCTGCTTTATATGCAACTAAGTTACTTCATGAGGCTGGGCTTCCTCCTGGTGTTTTAAATATAATATCTGGCTTTGGTCCAACTGCTGGTGCTGCTCTTGCTAGTCACATGGATGTAGATAAGATTGCTTTTACAGGTTCAACTAGTACCGGAAAAATTGTCCTTGAACTTGCTGCAAAGAGCAATCTTAAGGCTGTAACTTTGGAGCTTGGTGGGAAATCCCCTTTTATTGTATGCGAAGATGCTGATATAGATCAGGCTGTTGAGCTAGCACACTTTGCATTGTTCTTTAATCAGGGACAATGCTGCTGTGCTGGGTCTCGAACATTTGTACATGAACGTGTGTACGATGAGTTTATTGAGAAAGCAAAGGCACGTGCTTTGAAGCGTACTGTTGGTGATCCATTCAAAGAGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTGAGAAAATACTGAAGTACATTAGATCCGGTGTTGAAAGTGGAGCTACCCTTGAAACTGGAGGGGAGAGATTTGGCAACAAGGGCTTCTATGTTCAGCCTACTGTGTTCTCAAATGTTCAGGATGGCATGCTGATTGCAAAGGATGAGATATTCGGGCCAGTGCAATCCATATTAAAATTCAATGATATTGGTGAGGTGATTCGTAGAGCAAATGCCACACGCTATGGTCTTGCAGCAGGGGTGTTTACAAAGGACATTGACACTGCAAACACATTGACTCGAGCATTGAGAGCAGGAACAGTGTGGGTGAACTGCTTCGATACATTTGATGCAGCAATTCCTTTTGGAGGGTATAAGATGAGTGGACAGGGAAGAGAAAAAGGAGAATACAGTCTTAAGAACTACTTGCAAGTGAAGGCTGTTGTTACACCCTTGAAGAACCCAGCATGGCTTTGA 1593 0.4344 MASSIRISRLLSRSFVSASTTSVFSRGTFKYSTASAIEEPIEPSVKVQHTQLLIEGKFVDAASGKTFPTLDPRTGEVISHVAEGDHEDVDRAVAAARKAFDHGPWPKMTAYERQKVLLRAADLFEKHNDELAALETWDNGKPYAQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYATKLLHEAGLPPGVLNIISGFGPTAGAALASHMDVDKIAFTGSTSTGKIVLELAAKSNLKAVTLELGGKSPFIVCEDADIDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFIEKAKARALKRTVGDPFKEGIEQGPQIDSEQFEKILKYIRSGVESGATLETGGERFGNKGFYVQPTVFSNVQDGMLIAKDEIFGPVQSILKFNDIGEVIRRANATRYGLAAGVFTKDIDTANTLTRALRAGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi199g00008 530 FunFam Mitochondrial aldehyde dehydrogenase 2 302 491 - -
Gabi199g00008 530 FunFam Aldehyde dehydrogenase, putative 492 518 - -
Gabi199g00008 530 Pfam Aldehyde dehydrogenase family 58 520 IPR015590 GO:0016491
Gabi199g00008 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 302 491 IPR016163 GO:0016620
Gabi199g00008 530 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 54 326 - -
Gabi199g00008 530 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 324 335 IPR016160 GO:0016491
Gabi199g00008 530 CDD ALDH_F2BC 47 522 - -
Gabi199g00008 530 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 35 520 - -
Gabi199g00008 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 64 520 IPR016162 GO:0016491
Gabi199g00008 530 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 296 303 IPR029510 GO:0016491
Gabi199g00008 530 SUPERFAMILY ALDH-like 45 524 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi199g00008 Gabi-Chr199 91521 96030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi199g00008 6 530 Aldehyde Dehydrogenase Gene Family AT3G48000 77.341 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi199g00008 K00128 - gmx:100786773 956.436