Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1995g00015 ATGGTGCAATCAAAGAAATTCAGAGGTGTCAGGCAACGCCATTGGGGCTCTTGGGTCTCTGAGATTCGTCACCCATTATTGAAAAGGAGGGTGTGGCTTGGAACATTTGAAACTGCTGAAGAAGCAGCTAGAGCATATGATGAGGCAGCAATTTTGATGAATGGTAGAAACGCCAAAACAAACTTTCCAATTGCAGATAATCAAATGGGAAATCAAAGTTCTACTTCATCCTCATCCTCTTCCTCTTCCACAACATTTTCTTCAATTCTCAGTGCAAAGCTCAGGAAGTGCTGCAAGTCCCCTTCACCTTCCCTCACTTGCTTAAGGCTTGACACAGAGAATTCCCATTTTGGGGTGTGGCAGAAGCGAGCAGGGCCTCGTTCTGAATCAAACTGGATTATGATGGTTGAGTTGGAAAGGAAGAATCTTGGAGCTTCTGATTCAAAATTATCAGTGCCAGAGAAGGTAAAACCAGAAGAAAGCAAACGGTTGGATGAGGAGCAAAAGATTGCCTTGCAGATGATAGAAGAACTTCTGAATAGGAATTAA 549 0.4317 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMNGRNAKTNFPIADNQMGNQSSTSSSSSSSSTTFSSILSAKLRKCCKSPSPSLTCLRLDTENSHFGVWQKRAGPRSESNWIMMVELERKNLGASDSKLSVPEKVKPEESKRLDEEQKIALQMIEELLNRN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1995g00015 182 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Gabi1995g00015 182 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Gabi1995g00015 182 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Gabi1995g00015 182 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 147 - -
Gabi1995g00015 182 MobiDBLite consensus disorder prediction 144 164 - -
Gabi1995g00015 182 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Gabi1995g00015 182 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Gabi1995g00015 182 MobiDBLite consensus disorder prediction 63 82 - -
Gabi1995g00015 182 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Gabi1995g00015 182 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Gabi1995g00015 182 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Gabi1995g00015 182 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1995g00015 Gabi-Chr1995 182285 183303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1995g00015 1 182 AP2-EREBP Transcription Factor Family AT1G15360 64.824 3.74e-80 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi1995g00015 AP2 4.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1995g00015 - - gmx:100796962 283.108