Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1994g00002 ATGGCTCTTGTATCATCAGTTCTAATGCAATTGCCGTCTGAGCCAAAATCAATCCTTTTCTTTTCTATTTTGTGCTTCATAAGTGTTATTATGTTCATGCTTAAGCTCAAAAGAAAAAACAATTACAATCTGCCTCCATCCCCACCAAAGCTACCAATTATTGGAAATCTTCATCAACTAGGCACACTCCCACACCGCTCCTTGCAAACACTCTCTAAAAAGTATGGCCCTCTCATGTTGTTGCAGCTTGGACAAACAAAAACTCTTGTGGTTTCGTCGGCGGATATGGCCAGAGAAATAACAAAAACACATGATGTTGCTTTCTCCAATAGGCCTGAGTCTACAGCTGCTAAAATCTTTCTCTATGGATACCAGGATATTGGTTTTGCACCCTACGGCGAGGAGTGGAGACAAAAAAAGAAGATCTGTGTTCTTGATCTTTTGAGCCAGAAAAGGATGGGATCTTTTCATTCCATCAGACAAGAAGAAATTACAGAGTTGGTTGATACTATACGTGATGCATGTGCGAGTAAAAGATCCTCTGTGAATCTAAGGGAGATGTTGTTTGCAGCCTCAAACAATATAGTATCTAGATGTGTTCTTGGACAAAAATATGATACTCCAGATGGTACTACAAGCATTGGAGTGCTAGCAAGGAAAAATATGAAATTATTGGCAGCTTTCAGCGTTGGCGATTTCTTCCCTTCATTGGGTTGGATTGATGTTCTTACGGGCTTAATTTCAGAAATTAAGTCCACTTCTGCTGCATTAGATGCTTTCTTTGATGAGGTAATTGCACAACACAAGAGAAGCAACAAAAACGATGACAAAAACGATATTAAAGACTTTGCAGGGATCCTCCTTCAACTTCAAGAGGGTGGGAAGCTTGACTTTGAGCTTACACAAGATAACCTCAAAGCAATCCTAATGGACATGTACGTCGGTGGAAGTGACACTACTTCAACCAATCTGGAATGGGCTTTTGCTGAGCTCGTTAAGAATCCAAATACCATGAAGAAAGTCCAACAAGAGGTAAGAAGAGTTGTGGGGAAAAAATCAAAAGTGGATGAAAATGATGTGAATCAAATGAACTACTTGAAATGTGTAATCAAGGAAACTTTGAGATTACATCCACCCGTTCCCCTTTTGATTCCTCGAGAGACAATATCAAGTGTGAAACTAAAAGGGTATGATATTCCCCCCAAAACAAGGGTATTTATGAATGCATGGGCAATACAGAGAGACCCTGAATTATGGGACAATCCTGAAGAGTTTCTTCCCAAGAGATTTGAAGGTAACCAAGTTGATGTTAAAGGACAAGATTTTCAATTAATCCCATTTGGAATTGGGAGAAGGGGATGTCCTGGAATTTCGTTTGGGCTTGCTTCTACAGAGAATATACTTGCTAATCTTCTATATTGGTTCGATTGGAAGCTACCTAAAACTGGTGTATTGATGCAGGACTTAGACATGAGTGAGGTGAATGGACTCACTGTCTCCAAGAAAATACCACTTCATCTTGAACCAATACTATACTCTTTTGGTTCTAAACCTTGA 1557 0.3956 MALVSSVLMQLPSEPKSILFFSILCFISVIMFMLKLKRKNNYNLPPSPPKLPIIGNLHQLGTLPHRSLQTLSKKYGPLMLLQLGQTKTLVVSSADMAREITKTHDVAFSNRPESTAAKIFLYGYQDIGFAPYGEEWRQKKKICVLDLLSQKRMGSFHSIRQEEITELVDTIRDACASKRSSVNLREMLFAASNNIVSRCVLGQKYDTPDGTTSIGVLARKNMKLLAAFSVGDFFPSLGWIDVLTGLISEIKSTSAALDAFFDEVIAQHKRSNKNDDKNDIKDFAGILLQLQEGGKLDFELTQDNLKAILMDMYVGGSDTTSTNLEWAFAELVKNPNTMKKVQQEVRRVVGKKSKVDENDVNQMNYLKCVIKETLRLHPPVPLLIPRETISSVKLKGYDIPPKTRVFMNAWAIQRDPELWDNPEEFLPKRFEGNQVDVKGQDFQLIPFGIGRRGCPGISFGLASTENILANLLYWFDWKLPKTGVLMQDLDMSEVNGLTVSKKIPLHLEPILYSFGSKP 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1994g00002 518 CDD CYP71-like 74 505 - -
Gabi1994g00002 518 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 Gene3D Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Gabi1994g00002 518 PANTHER CYTOCHROME P450 71B11-RELATED 29 509 - -
Gabi1994g00002 518 FunFam Cytochrome P450 83B1 32 508 - -
Gabi1994g00002 518 Pfam Cytochrome P450 45 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1994g00002 518 SUPERFAMILY Cytochrome P450 45 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1994g00002 Gabi-Chr1994 24427 26321 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1994g00002 18 506 Cytochrome P450 AT3G48280 44.715 1.11e-146 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1994g00002 K20617 - gmx:100792382 707.983