Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi198g00003 ATGGGAAGGAACGCAGATCCTTCAACTTCAACAAAGTCTTTGGACCATCTGCAACCCAAGCAGAGGTCTTCTTTGATATACAACCACTTATTAGATCTGTTTTCCTCGATGGTTATAATGTTTGCATATGGACAAACTGGATCAGGAAAAACTTACACTATGACTGGACCAAAAGAGATCATAGAGAAAAGCCAAGATGTAAATTATAGGGCTCTCAGTGATCTGTTTGATTTAGCAGATCAAAGAAAGGACACTTTCCACTATGATGTTTCTGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGGGATCTACTGGTCACTGATGGAACAAACAGAAGATATCCTTTTACCATTTTGTTGTATTTTCTAGCATTTTTTTGTAATTTCATAATGAAACATGCATTATTTCCCAGGCTATAG 423 0.3617 MGRNADPSTSTKSLDHLQPKQRSSLIYNHLLDLFSSMVIMFAYGQTGSGKTYTMTGPKEIIEKSQDVNYRALSDLFDLADQRKDTFHYDVSVQMIEIYNEQVRDLLVTDGTNRRYPFTILLYFLAFFCNFIMKHALFPRL 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi198g00003 140 Pfam Kinesin motor domain 37 112 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi198g00003 140 ProSiteProfiles Kinesin motor domain profile. 1 140 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi198g00003 140 Gene3D Kinesin motor domain 11 120 IPR036961 -
Gabi198g00003 140 PANTHER KINESIN-LIKE PROTEIN KLP-3 38 114 IPR027640 GO:0003777|GO:0007018
Gabi198g00003 140 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 114 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi198g00003 Gabi-Chr198 16884 18392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi198g00003 38 113 Calmodulin-binding Proteins AT5G65930 35.526 7.75e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi198g00003 K10406 - ccaj:109806940 143.665