Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1989g00008 ATGGAGAAGAACCTTGTTGAAAATTCCGGCAGTTTCGCTCGCAGAGACGAGCACAACAACAGCAGCAACAACGCCGGCGACACGCCGCGTTCTCCAATGCCGGACATTGCAGAAGTAGAAGTGGATCCCAAACCTGACGACGTCGGCGAAACCGCTGAAGCGGAAGAAGCACCGCCACAAGAACCAGAAGCGCAACCGGAAGAGGGAGATGATGAGAAGAACGAAGAGAAGAAAGAAGAGGAGGTGGTGGAGGAGGAGGAGTCTCCTCCCCCGAGCCTCGAGATGGTTTCAGATGAGATCGATCAATGGCTCCTGAATCTGCAGCAAAATAATAATGATGATGATGATAATTATAATAAAGAAGGGTCAGGGTCATTTGAGATCCCTAGTTTCGTGGAGAAGTTCTTATATCTGGTGGAGGAGAAAATAGTGAAGTACGACACAGGCGAAGGTAAACCCAAATGGGGTGAGGTTGCTGAGGAAGATTCCTGGTTGCTTGAAACTGTGGATCGGATATCCAAGTTGACGAAATCGGTGAATCTGACTCCTCCTCATCATCAATCAGAAGAAGAAAAACAAGCAGAAGAAGAGGAGGAGATCATTGCACGAAAACACTCGCTGGTGAACCGCATTGGTTCGATCCAACAGCGTGCGATGTCGTATTTGGAGGAAGACTTCCGGTTGTTAATGGACGAATCTAGAAATCCAATAACAGAATTGGATCCCGGAGGGAATAAAGATCCGGATCCGGATCATCATCAACCTGCTGAATCCGAAACGAACTTCCCGGGTTACCCGGATGAGGCCATTGCCACCCTGACCAAGATCGCTACAGAGATGATCTCCAGCGGCTACGAATCGGAGTGCTGCCAGGTGTACATCGTCTCAAGGAGAAACGCGTTTGAAGAGATCCAGCAGAAGCTAGGGTTGGAGAAAATCAGCATCGACGAGATGGTTCAGAAGGTGCAATGGGAGACTCTCGCAAGGGACATGATCCCCGCCTGGATCAACACCTTCAAGCAGTGTGCTGCCGTGTACTTCCCCGGAGAAAGGAAACTGGCAGAGGCGGTTTTCGCTGAGAATCCATCGGTTTCGGCAGGGCTCTTCAGCAGCCTCACCCGCGGCGTGGTGATTCAACTCCTCAACTTCGCGGAGGGCGCAGCCATGACAAAGCGCGCCGGCGAGAAGCTCTTCAAGATCCTTGACATGTACGAGACCCTCCGGGACTTGATCCCGGAATTAGACGGACTGTTTCCAGAGGAATCCGTCGAGGAGCTGAAGACAGAGATGTTGCTCGCCAAATCTAGGCTTGGCGAGCTGGCCATCTCCATCTTCTGTGACCTCGAGAACTCAATTAAATCGGAAACCGGAAGAACTCCGGTCCCCGGTGGTGCCGTCCACCCCCTCACCCGCTACATAATGAACTACCTCAACATAGCAGGCGATTACAAGGAGACACTTGAACAGGTTTTTAAGGAATACTCAAAGATCGAGCGCGCCGATTCCACCAGCAGGCCCCACCACGAAAATGAAGCCGGAGGAGGAAGCAGCGGCGCCGCCAATGTTTCGTCGCCATTCGCGGCGCAGGTTATGAGGGTGATGGAGTTGCTAGACTCAAGCCTTGAAGGTAAGGCGAAGCTGTACAGGGACGTTGCACTGAGCAACTTCTTCATGATGAACAATGGTAGGTACATTCTGCAGAAGATCAAGGCTTCCTCGGAGATGAGCAAGGTGATGGGTGACACGTGGTGCCGGAAGAGATCATCGGAGCTGAGAACATACCACAAGAACTACCAGAGGGAGACATGGAACAGGGTTTTGACATGCCTGACCCATGAAGGGTTGAGCGTGCATGGGAAGGTGCAGAAGCCAGTGCTGAAGGAGAGGTTCAAGAGCTTCAATGCTCTGTTTGATGAGATTCACAGGACACAGAGCCAGTGGGTTGTGAAGGACGAGCAGCTTCAGTCGGAGCTGAGGGTTTCGATATCGGCGGTGGTGATTCCGGCATACAGGTCATTCCTTGGGAGGTTTGCACAAATATTGGACCCTGGGAGACAAACTGAGAAGTATATAAAGTATCAACCTGAAGATATAGAGACTTACGTTGATGAGTTGTTTGATGGAAAGCCTCACCAATCCATAACTAAAAGGAAAACATAA 2160 0.5097 MEKNLVENSGSFARRDEHNNSSNNAGDTPRSPMPDIAEVEVDPKPDDVGETAEAEEAPPQEPEAQPEEGDDEKNEEKKEEEVVEEEESPPPSLEMVSDEIDQWLLNLQQNNNDDDDNYNKEGSGSFEIPSFVEKFLYLVEEKIVKYDTGEGKPKWGEVAEEDSWLLETVDRISKLTKSVNLTPPHHQSEEEKQAEEEEEIIARKHSLVNRIGSIQQRAMSYLEEDFRLLMDESRNPITELDPGGNKDPDPDHHQPAESETNFPGYPDEAIATLTKIATEMISSGYESECCQVYIVSRRNAFEEIQQKLGLEKISIDEMVQKVQWETLARDMIPAWINTFKQCAAVYFPGERKLAEAVFAENPSVSAGLFSSLTRGVVIQLLNFAEGAAMTKRAGEKLFKILDMYETLRDLIPELDGLFPEESVEELKTEMLLAKSRLGELAISIFCDLENSIKSETGRTPVPGGAVHPLTRYIMNYLNIAGDYKETLEQVFKEYSKIERADSTSRPHHENEAGGGSSGAANVSSPFAAQVMRVMELLDSSLEGKAKLYRDVALSNFFMMNNGRYILQKIKASSEMSKVMGDTWCRKRSSELRTYHKNYQRETWNRVLTCLTHEGLSVHGKVQKPVLKERFKSFNALFDEIHRTQSQWVVKDEQLQSELRVSISAVVIPAYRSFLGRFAQILDPGRQTEKYIKYQPEDIETYVDELFDGKPHQSITKRKT 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1989g00008 719 SUPERFAMILY Cullin repeat-like 167 707 IPR016159 -
Gabi1989g00008 719 PANTHER EXOCYST COMPLEX PROTEIN EXO70 136 708 IPR004140 GO:0000145|GO:0006887
Gabi1989g00008 719 MobiDBLite consensus disorder prediction 15 29 - -
Gabi1989g00008 719 MobiDBLite consensus disorder prediction 52 92 - -
Gabi1989g00008 719 MobiDBLite consensus disorder prediction 37 51 - -
Gabi1989g00008 719 MobiDBLite consensus disorder prediction 1 125 - -
Gabi1989g00008 719 Pfam Exo70 exocyst complex subunit 334 703 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi1989g00008 719 MobiDBLite consensus disorder prediction 498 520 - -
Gabi1989g00008 719 MobiDBLite consensus disorder prediction 235 266 - -
Gabi1989g00008 719 Gene3D Exocyst complex component Exo70 167 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1989g00008 Gabi-Chr1989 162058 164286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1989g00008 80 719 EXO70 exocyst subunit family AT5G13990 51.714 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1989g00008 K07195 - gmx:100820172 897.501