Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi197g00002 ATGGCTTCCAACACATTGATGAGTTCTGCTCTCTCAGCCTTCCCATCTCTTCTTTCTTCCTCAAAATCAAGATTTGCCTCGGCGGTTCCACTTTCGTGCTTTGGTTCCAATTCCGCTGGTCGCTTCACCATGACTGCTGACTGGATGCCAGGCGAGCCTAGACCCCCTTATCTTGATGGTTCAGCTCCTGGTGACTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTACCAGAGAATCTTGAGAGATTCAAAGAGTCAGAACTCATTCACTGCAGATGGGCCATGCTTGCTGTTCCTGGGATGTTGGTACCAGAGGCATTGGGCTTAGGCAATTGGGTACAAGCTCAAGAGTGGGCAGCAGTTCCAGGGGGCCAAGCAACCTACCTAGGCAACCCAGTTCCATGGGGCACCCTCCCCACCGTTCTGGTAATTGAATTCCTTGCTATTGCCTTCGTGGAGCATCAAAGGAGCATGGAGAAAGACCCAGAGAAGAAGAAATATCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAGGACCCTAAAAAGTTCCACGAATACAAAGTCAAAGAAATTAAGAATGGACGTCTTGCTCTGTTGGCTTTTGTGGGGTTCTGTGTTCAACAATCAGCTTATCCCGGCACTGGACCCTTGGAGAATTTGGCTACACACTTGGCTGATCCATGGCACAACAACATTGGAAATGTCCTTATTCCCTAA 720 0.4875 MASNTLMSSALSAFPSLLSSSKSRFASAVPLSCFGSNSAGRFTMTADWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGMLVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTVLVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNVLIP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi197g00002 239 Pfam Chlorophyll A-B binding protein 55 209 IPR022796 -
Gabi197g00002 239 Gene3D Chlorophyll a/b binding protein domain 49 235 - -
Gabi197g00002 239 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 38 234 IPR001344 GO:0009765|GO:0016020
Gabi197g00002 239 FunFam Chlorophyll a-b binding protein, chloroplastic 49 235 - -
Gabi197g00002 239 SUPERFAMILY Chlorophyll a-b binding protein 38 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi197g00002 Gabi-Chr197 50886 52854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi197g00002 1 196 Chloroplast and Mitochondria Gene Families AT3G54890 82.323 2.09e-108 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi197g00002 K08907 - gmx:100305992 436.032