Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi197g00001 ATGGCTTCCAACACATTGATGAGTTCTGCTCTCTCAGCCTTCCCATCTCTTCTTTCTTCCTCAAAATCAAGATTTGCCTCGGCGGTTCCACTTTCGTGCTTTGGTTCCAATTCCGCTGGTCGCTTCACCATGACTGCTGACTGGATGCCAGGCGAGCCTAGACCCCCTTATCTTGATGGTTCAGCTCCTGGTGACTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTACCAGAGAATCTTGAGAGATTCAAAGAGTCAGAACTCATTCACTGCAGATGGGCCATGCTTGCTGTTCCTGGGATGTTGGTACCAGAGGCATTGGGCTTAGGCAATTGGGTACAAGCTCAAGAGTGGGCAGCAGTTCCAGGGGGCCAAGCAACCTACCTAGGCAACCCAGTTCCATGGGGCACCCTCCCCACCGTTCTGGTAATTGAATTCCTTGCTATTGCCTTCTTCCACGAATACAAAGTCAAAGAAATTAAGAATGGACGTCTTGCTCTGTTGGCTTTTGTGGGGTTCTGTGTTCAACAATCAGCTTATCCCGGCACTGGACCCTTGGAGAATTTGGCTACACACTTGGCTGATCCATGGCACAACAACATTGGAAATGTCCTTATTCCCTAA 624 0.4936 MASNTLMSSALSAFPSLLSSSKSRFASAVPLSCFGSNSAGRFTMTADWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGMLVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTVLVIEFLAIAFFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNVLIP 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi197g00001 207 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 37 134 IPR001344 GO:0009765|GO:0016020
Gabi197g00001 207 Pfam Chlorophyll A-B binding protein 55 152 IPR022796 -
Gabi197g00001 207 Pfam Chlorophyll A-B binding protein 152 177 IPR022796 -
Gabi197g00001 207 Gene3D Chlorophyll a/b binding protein domain 154 206 - -
Gabi197g00001 207 Gene3D Chlorophyll a/b binding protein domain 49 153 - -
Gabi197g00001 207 SUPERFAMILY Chlorophyll a-b binding protein 38 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi197g00001 Gabi-Chr197 50886 52857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi197g00001 1 164 Chloroplast and Mitochondria Gene Families AT3G54890 66.162 4.80e-76 226