Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi1977g00015 | ATGGAGAATAATCAAAAGGAGGAGGAGGAGGAGGTGCAAGTTGGGGAGGAGAAAGATGAGGTGGGGCCCATGGGTGGGAAGGAGAAGGAGGACGAAGAAGAAGAAGAGGAGGATCAAGGAGAAGTTGGTTCGAGCTTGACAATGGAGAGGGTTGCTGTAGCCAAAAAATTCATTGAGAACCATTACAGGGCTCAAATGAAACTCATCCAAGATCGCAAAGAGAGGCGTTCAGTGCTACAAAAGAAGTTAGAGTCTTCTCACGTACCAGAAGAGGAACAGATCAATCTACTGAAGGATTTAGAGCGCAAGGAGACCGAGTATATACGATTAAAAAGACATAAAATATGCGTTGATGATTTTGACCTTCTAGCCATTATTGGCAGGGGAGCCTTTGGGGAGGTAAGACTTTGTCGGGAGAAGAAATCAGGTAATATATATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTTAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAACCTACTTGCAGAAGTTGCCAGTGACTGCATTGTGAAACTCTATTACTCGTTTCAGGATGCTGAACATTTATATCTGATAATGGAATATTTACCTGGTGGTGATATAATGACATTGTTGATGAGGGAAGAAACTTTGACTGAAACTGTGGCTAGATTTTACATTGCCCAGAGTGTTTTGGCTATAGAGTCTATTCATAAACACAACTACATCCATCGAGATATAAAACCTGACAACCTTCTATTGGACAAAAATGGTCATATGAAGCTCTCTGATTTTGGTCTTTGCAAGCCACTTGACTGCTCAAATTTATCGTCTATAAATGAAAATGAAATCCTTGATGATGAGAACATGAATGATACCATGGATGTAGATGGAGCTTTCCGAAATAGCAGAAACGGTAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAACATTGGCAAATGAACCGGAGGAAGTTGGCATTTTCCACTGTTGGAACTCCAGATTATATTGCTCCGGAAGTGTTACTGAAAAAGGGTTACGGTGTGGAGTGTGACTGGTGGTCTCTTGGTGCTATAATGTATGAGATGCTTGTTGGTTACCCCCCATTTTACTCTGATGAGCCCGTAACAACTTGCAGAAAGATTGTGCATTGGAAAAATCACTTAAAATTTCCGGATGAGGCAAGATTGACGCCTGAAGCAAAGGATCTTATATGTGGTTTGCTTTGTGGTGCTCAACATAGGCTCGGTACTGGAGGAGCAGATGAAATTAAAGCTCATCCTTGGTTCAAAGATGTCGTATGGGATAAGCTCTATGAAATGGAGGCAGCATTTAAACCACAAGTCAATGGGGAGCTTGACACTCAGAATTTTATGAAATTTGATGAGGTTGATCAACCAAAACCAGCTAGAACTGGATCCGGACCAATCAGAAAGACGCTCTTAACTCCTCAAGATCTCAGTTTCGTTGGCTATACATATAAGAATTTTGCTGCTGTCAAGGGGATGAATCTTTCTACTGAAAACGGGAAGTTGTTACCATCACGGTCAATTGACTCCTCAATCAGTGATTCTGTAATTGACTACTCAACCTGA | 1587 | 0.4178 | MENNQKEEEEEVQVGEEKDEVGPMGGKEKEDEEEEEEDQGEVGSSLTMERVAVAKKFIENHYRAQMKLIQDRKERRSVLQKKLESSHVPEEEQINLLKDLERKETEYIRLKRHKICVDDFDLLAIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASDCIVKLYYSFQDAEHLYLIMEYLPGGDIMTLLMREETLTETVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSSINENEILDDENMNDTMDVDGAFRNSRNGRRWKSPLEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDEPVTTCRKIVHWKNHLKFPDEARLTPEAKDLICGLLCGAQHRLGTGGADEIKAHPWFKDVVWDKLYEMEAAFKPQVNGELDTQNFMKFDEVDQPKPARTGSGPIRKTLLTPQDLSFVGYTYKNFAAVKGMNLSTENGKLLPSRSIDSSISDSVIDYST | 528 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi1977g00015 | 528 | FunFam | Non-specific serine/threonine protein kinase | 326 | 445 | - | - | |
Gabi1977g00015 | 528 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 428 | 501 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Gabi1977g00015 | 528 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 239 | 251 | IPR008271 | GO:0004672|GO:0006468 | |
Gabi1977g00015 | 528 | CDD | STKc_NDR_like | 118 | 492 | - | - | |
Gabi1977g00015 | 528 | Gene3D | Phosphorylase Kinase; domain 1 | 110 | 205 | - | - | |
Gabi1977g00015 | 528 | ProSitePatterns | Protein kinases ATP-binding region signature. | 126 | 149 | IPR017441 | GO:0005524 | |
Gabi1977g00015 | 528 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 23 | 462 | - | - | |
Gabi1977g00015 | 528 | Gene3D | Transferase(Phosphotransferase) domain 1 | 206 | 444 | - | - | |
Gabi1977g00015 | 528 | ProSiteProfiles | Protein kinase domain profile. | 120 | 427 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi1977g00015 | 528 | FunFam | Non-specific serine/threonine protein kinase | 446 | 456 | - | - | |
Gabi1977g00015 | 528 | FunFam | Non-specific serine/threonine protein kinase | 204 | 271 | - | - | |
Gabi1977g00015 | 528 | CDD | MobB_NDR_LATS-like | 54 | 115 | - | - | |
Gabi1977g00015 | 528 | SMART | serkin_6 | 120 | 427 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi1977g00015 | 528 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Gabi1977g00015 | 528 | SMART | pkinase_C_6 | 428 | 493 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Gabi1977g00015 | 528 | FunFam | Non-specific serine/threonine protein kinase | 81 | 203 | - | - | |
Gabi1977g00015 | 528 | SUPERFAMILY | Protein kinase-like (PK-like) | 103 | 471 | IPR011009 | - | |
Gabi1977g00015 | 528 | Pfam | Protein kinase domain | 319 | 427 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi1977g00015 | 528 | Pfam | Protein kinase domain | 123 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi1977g00015 | 528 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi1977g00015 | Gabi-Chr1977 | 218350 | 230403 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi1977g00015 | 32 | 503 | AGC Kinase Gene Family | AT4G33080 | 78.224 | 0.0 | 781 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_NDR | Gabi1977g00015 | Pkinase | 2.2e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi1977g00015 | K08790 | - | gmx:100811359 | 859.366 |