Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1975g00010 ATGCTCCTTCACTCTAATCATCTCCCAACCCTCTCTTCCTACACTCATTCTCCAAACCCTAACTATAACCGTAACCGTTACCATAATGCTAACTCAACTGTTTACATCAAGTTCCGAACAAACTACCGTGAAAACCTGCGTTACCTTAAAACCTTAACCATAATCGACCCAAAAACCCAACCCAACAACCTCCCTCTCCCCGACGCCGTCGACCACATCCTCGCCACACTCAACTTCCTCAAATCCCATTCATTCTCCGACGCCGACATCCCCCGCCTCGCCTTCCTCTGTCCCCACCTCTTCTCCTCCGCCGTCGACCCCACCGACATAGCCCCCGTCTTCCATTTCCTCGCCGCCGACCTCCTCGCCACCGCCGACCAGTCCCGGGGCCTCATCGTCCGGTGCCCCAAGCTCCTCTTCTCAGACGTCGACCTCTGCCTCCGACCCACCCTGCGGTTTCTCCGGGAGGTTGGGGTTGGCGACCTGAACCGGGCGACGAACCGGAACGCTCACCTGCTGAACACGCGCGTGGAGAAGCTGCGCGTGAAGGTGAGGTTCCTCGAGGATGTGGGGTTGACGAACGAGGAGGCTATGAAGGCTTGTGCAAGGTTGCCGGCGATATTCGGGTATGGGGTGGAGAATAATCTGTGGCCAAAGTTTGAGTATTTGGTGAAGGAGATGGAGAGAGAGTTGGAGGAGTTGAAGGGTTTTCCTCAGTACTTTGGGTTCAGTTTGGAGAAGAGGATTGTGCCTCGGCATTTGCATTTGAAGGAGAGAGGTGTGAAGATTCCGTTGAATAGAATGTTGCTGTGGGGTGATGACAAATTCTTCGCGAAGTGGAAGTGA 846 0.5449 MLLHSNHLPTLSSYTHSPNPNYNRNRYHNANSTVYIKFRTNYRENLRYLKTLTIIDPKTQPNNLPLPDAVDHILATLNFLKSHSFSDADIPRLAFLCPHLFSSAVDPTDIAPVFHFLAADLLATADQSRGLIVRCPKLLFSDVDLCLRPTLRFLREVGVGDLNRATNRNAHLLNTRVEKLRVKVRFLEDVGLTNEEAMKACARLPAIFGYGVENNLWPKFEYLVKEMERELEELKGFPQYFGFSLEKRIVPRHLHLKERGVKIPLNRMLLWGDDKFFAKWK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1975g00010 281 PANTHER CGI-12 PROTEIN-RELATED 178 279 IPR003690 GO:0003690|GO:0006355
Gabi1975g00010 281 MobiDBLite consensus disorder prediction 6 26 - -
Gabi1975g00010 281 MobiDBLite consensus disorder prediction 1 26 - -
Gabi1975g00010 281 Gene3D Transcription termination factor 3, mitochondrial 56 281 IPR038538 -
Gabi1975g00010 281 SMART mt_12 198 230 IPR003690 GO:0003690|GO:0006355
Gabi1975g00010 281 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Gabi1975g00010 281 SMART mt_12 231 262 IPR003690 GO:0003690|GO:0006355
Gabi1975g00010 281 SMART mt_12 91 124 IPR003690 GO:0003690|GO:0006355
Gabi1975g00010 281 SMART mt_12 163 193 IPR003690 GO:0003690|GO:0006355
Gabi1975g00010 281 Pfam mTERF 129 276 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1975g00010 Gabi-Chr1975 149236 150281 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi1975g00010 mTERF 3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1975g00010 K15031 - gmx:100812333 403.675