Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1975g00009 ATGGAAGGAGAGAGAGGTGTTCCAAACTACGAGCTTCAAGTTTCATTCACCAACACCCCACAAGCCATGAACGAAATGGGTTTTGTTCAATTTGAAGAAAATCAGGTCCTTGGATTCTTGTCACCCTCAGCACAATCTCAATCTTCTCAGCTCTCTCAATCCTTAAACTCTGGCAGCACCGCCGCCGCCACCACAACCATCGGATTTAGTCATAACGAACTTGTCACCAGAACTTGGAATAACGACCAGGTGGGAAATCTGGATCCCAAAGTTGGCAACGATGAAAATTTCACTGGAAATGCCAGTGATGGTGACAACAACTCATGGTGGAGGAGTGGAGCTACAGAGAAGAGCAAGGTGAAAACAAGGAGGAAGCTTAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGTGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTACTACCGCTGCACCTATAGCAACTGTAGGGTGAAGAAGAGGGTTGAACGACTGTCAGAGGATTGTCGTATGGTAATAACCACCTATGAAGGTAGACATAATCACTTCCCTAGTGACGACTCAAATTCATCGGACCATGAATGCTTTACCTCTTTCTAA 651 0.4424 MEGERGVPNYELQVSFTNTPQAMNEMGFVQFEENQVLGFLSPSAQSQSSQLSQSLNSGSTAAATTTIGFSHNELVTRTWNNDQVGNLDPKVGNDENFTGNASDGDNNSWWRSGATEKSKVKTRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTYSNCRVKKRVERLSEDCRMVITTYEGRHNHFPSDDSNSSDHECFTSF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1975g00009 216 FunFam WRKY transcription factor 57 128 202 - -
Gabi1975g00009 216 Gene3D WRKY domain 128 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi1975g00009 216 MobiDBLite consensus disorder prediction 80 114 - -
Gabi1975g00009 216 Pfam WRKY DNA -binding domain 143 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1975g00009 216 SUPERFAMILY WRKY DNA-binding domain 134 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi1975g00009 216 ProSiteProfiles WRKY domain profile. 137 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1975g00009 216 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 45 204 IPR044810 GO:0003700
Gabi1975g00009 216 SMART WRKY_cls 142 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1975g00009 Gabi-Chr1975 128069 134131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1975g00009 3 216 WRKY Transcription Factor Family AT2G44745 60.987 1.83e-77 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi1975g00009 WRKY 2.4e-24 CL0274