Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1975g00006 ATGGGTCACTCCAATTTATACCTTCTAGTTTCATCTTTTCTTGTTTTCCCTTTGTTGCTGAGTACTGTCCATGCCAGCAAACAGTGCTACGTTGTTTATTTGGGAGCACATTCTCATGGTCCAACCCCTTCATCTGTTGAGCTTGAAACTGCAACATATTCTCATTATGATTTACTGGGTTCAACCTTTGGAAGCCATGAGAAGGCGAAAGAAGCAATTATTTATTCATATAATAGACACATCAATGGCTTTGCAGCTGTTCTTGAAGAGGAAGAAGTAGCACATCTTGCAAAAAACCCCAACGTTGTATCTGTGTTCTTGAGCAAAGAGTATAAACTGCACACTACCCGTTCATATGAGTTTCTTGGACTGCATAGAAATGGTATGAACTCAGCATGGCAAAAGGGAAGATTTGGTGAAAATACAATTATTGCTAACATTGATACAGGAGTTTGGCCTGAATCCAAAAGTTTTAGTGACGAAGGAATAGGCCCTGTCCCAGCAAAATGGCGTGGGGGTAATGTCTGTCAAATTAACAAACTCCGGGGTTCAAAGAATGCTCCATGTAACAGGAAGCTAATTGGAGCAAGATTCTTCAACAAAGCTTATGAGGCATTTAAGGGCAAACTTCCCAGATCACAACAAACAGCACGTGACTTTGTAGGACATGGTACACATACTCTATCAACCGCAGGTGGCAATTTTGTTCCTGGTGCAAATGTCTTTGGTAATGGCAATGGCACTGCAAAGGGTGGATCCCCAAGATCAAGAGTTGCAACCTACAAAGTGTGCTGGTCTCTAAACGATGAAGCAAGCTGCTTTGGTGCGGATGTATTAGCTGCTATTGACCATGCAATAGGTGATGGTGTTGATGTGATTTCCATTTCTGCTGGAGGTCTTAGTCCTGAAGAAATATTTAAAGATGTAATTTCAATAGGGGGATTCCATGCACTTGCTAGAAATATACTATTAGTTACATCTGCAGGAAATGATGGACCAACACCTGGAACTGTTTTGAATGTTGCTCCATGGCTATTCACAGTTGCTGCTAGCACAATAGATAGAGACTTTAGAAGTACTTTAACTTTTGGTAACAATCAACAAATCACGGGAGTCAGTCTTTTTGTAAACATACCACCCAACCAGTCCTTTTCTCTGATCGGTGCTGCTAATGCTAAACTTGCCAATGCGACAAAACGTGATGCTCAACTTTGTAAGGGTGGAACACTTGTTCCTGCAAAAGCAAAGGGCAAAATAGAGGCATGTTTTCGAGAAGGAAAAATAAAATCAGTTGCTGAGGGTCAGGAAGCTCTGTCTGCAGGCGCAAAGGGAATGATTTTGCAAAATCAAAAGCAAAGTGGAAATACACTTCCTTCTGAGCCTCAAAGTGGAAATACATTTGTGTTTCCTGACAACTATCCTGAAAATCTAACACCAACCACGCCTAGTATTTTTGACATAACTGCCACGGACTCTACAATAAACTCATTAACTACATTAAGGATATCCCCTGAAAAAACTTTCAATAGAAGAAAGCCAGCTCCAGTTATGGCTTTATTCTCATCTAGAGGACCCAATGAGATTCAGCCATCAATACTCAAGCCTGATATAACTGCACCAGGTGTGAATATACTTGCTGCCTATTCACCTGCCGCAAGTGCGTCTGACCTACCATCAGACACTCGCCGAGGGTTTCCATTCAATGTACTACAAGGAACTTCTATGTCTTGTCCACATGTTGCTGGCATTGCTGGACTTCTCAAAACCCTTCATCCTAGTTGGAGTCCTGCAGCTATTAAATCAGCAATCATGACCACAGCAACCACACAAGATAACACCAACGGGCCAATTAAGGATGAATTCGAGAAAACAAAAGCAACTCCATTCGCTTATGGTTCAGGACATGTTCAACCTGACCTTGCTATAGATCCTGGACTTGTTTATGATCTAAGCCTTACTGATTATCTGAACTTCTTATGTGCTTCTGGTTATGACCAACAACTCATTTCCACACTTAATTTCAATAGGACATTTATTTGTTCAAGATCTCACAGCATAACAGACTTGAACTACCCTTCAATCACATTGCCAAATCTTGGGTTAAACGCTGTAAACGTTTCTCGTACAGTCACCAATGTTGGGACACCAAGCAGCACATATTTTGCAAATGCCCAAATGCTTGGATTTAACATTGTTGTTGTACCGAATAGCTTAAGTTTCAAGAAAATTGGTGAAAAGAAGACATTTCAGGTGATTGTGCAAGCAAGGAGTGTGACTAATATGGGAACTTATCAGTTTGGAGAATTGAGATGGACAAATGGAAAGCATATAGTCAGAAGTCCCATAACAGTTCGGCGTATATGA 2364 0.4095 MGHSNLYLLVSSFLVFPLLLSTVHASKQCYVVYLGAHSHGPTPSSVELETATYSHYDLLGSTFGSHEKAKEAIIYSYNRHINGFAAVLEEEEVAHLAKNPNVVSVFLSKEYKLHTTRSYEFLGLHRNGMNSAWQKGRFGENTIIANIDTGVWPESKSFSDEGIGPVPAKWRGGNVCQINKLRGSKNAPCNRKLIGARFFNKAYEAFKGKLPRSQQTARDFVGHGTHTLSTAGGNFVPGANVFGNGNGTAKGGSPRSRVATYKVCWSLNDEASCFGADVLAAIDHAIGDGVDVISISAGGLSPEEIFKDVISIGGFHALARNILLVTSAGNDGPTPGTVLNVAPWLFTVAASTIDRDFRSTLTFGNNQQITGVSLFVNIPPNQSFSLIGAANAKLANATKRDAQLCKGGTLVPAKAKGKIEACFREGKIKSVAEGQEALSAGAKGMILQNQKQSGNTLPSEPQSGNTFVFPDNYPENLTPTTPSIFDITATDSTINSLTTLRISPEKTFNRRKPAPVMALFSSRGPNEIQPSILKPDITAPGVNILAAYSPAASASDLPSDTRRGFPFNVLQGTSMSCPHVAGIAGLLKTLHPSWSPAAIKSAIMTTATTQDNTNGPIKDEFEKTKATPFAYGSGHVQPDLAIDPGLVYDLSLTDYLNFLCASGYDQQLISTLNFNRTFICSRSHSITDLNYPSITLPNLGLNAVNVSRTVTNVGTPSSTYFANAQMLGFNIVVVPNSLSFKKIGEKKTFQVIVQARSVTNMGTYQFGELRWTNGKHIVRSPITVRRI 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1975g00006 787 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Gabi1975g00006 787 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Gabi1975g00006 787 PRINTS Subtilisin serine protease family (S8) signature 571 587 IPR015500 -
Gabi1975g00006 787 Pfam Subtilase family 139 613 IPR000209 GO:0006508|GO:0008236
Gabi1975g00006 787 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 114 IPR037045 -
Gabi1975g00006 787 ProSitePatterns Serine proteases, subtilase family, serine active site. 572 582 IPR023828 -
Gabi1975g00006 787 CDD PA_subtilisin_like 360 470 - -
Gabi1975g00006 787 FunFam Subtilisin-like protease SBT5.3 19 114 - -
Gabi1975g00006 787 Gene3D Peptidase S8/S53 domain 142 655 IPR036852 GO:0004252|GO:0006508
Gabi1975g00006 787 Gene3D - 659 787 - -
Gabi1975g00006 787 Gene3D - 354 509 - -
Gabi1975g00006 787 Pfam Fibronectin type-III domain 688 784 IPR041469 -
Gabi1975g00006 787 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 51 784 IPR045051 -
Gabi1975g00006 787 FunFam Subtilisin-like protease SBT1.5 141 364 - -
Gabi1975g00006 787 Pfam Peptidase inhibitor I9 30 114 IPR010259 -
Gabi1975g00006 787 SUPERFAMILY Subtilisin-like 113 646 IPR036852 GO:0004252|GO:0006508
Gabi1975g00006 787 CDD Peptidases_S8_3 111 608 IPR034197 -
Gabi1975g00006 787 ProSiteProfiles Serine proteases, subtilase domain profile. 118 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1975g00006 Gabi-Chr1975 99159 106186 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1975g00006 18 785 Subtilisin-like Serine Gene Family AT5G59810 52.246 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1975g00006 - - gmx:100803751 1221.84