Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1975g00003 ATGGATCGCTCAAATTTATACCTTCTTGTTTCATCTGTTCTTGTTTTCACTGTTTTGGTGAATGTTGTCCATGCCAGCAAACAGTGCTACATTGTTTACTTGGGAGCACATTCTCATGGTCCAACCCCTTCATCTGTTGACCTTGAAACTGCAACATATTCTCATTATGATTTACTGGGTTCAATCTTGGGAAGCCATGAGAAGGCCAAAGAAGCAATTATTTATTCATACAATAGACACATCAATGGCTTTGCAGCTGTTCTTGAAGAGGAAGAAGCAGCACATATTGCAAAAAACCCTAACGTTGTATCTGTGTTCTTGAGCAAAGAGTATAGACTGCACACTACCCGTTCATATGAGTTTCTTGGACTGCAAAGAAATGGTATGAACTCAGCATGGCAAAAGGGAAGATTTGGTGAAAATACAATTATTGCTAACATTGATACAGGAGTGTGGCCTGAATCCAAAAGTTTTAGTGACCAAGGAATAGGCACTGTCCCAGCAAAATGGCGTGGGGGCAATGTCTGTCAAATTAACAAACTCCGAGGTTCAAAGAATGTCCCATGTAACAGGAAGCTAATTGGAGCAAGATTCTTCAGCAAAGCTTATGAGGCATTTAACGGCAAACTTCCCACATCACAACAAACAGCACGTGACTTTGTAGGACATGGTACACATACTCTATCAACCGCAGGTGGCAATTTTGTTCCTGGTGCAAGTGTCTTTGCAGTTGGAAATGGCACTGCAAAGGGTGGATCCCCAAGAGCAAGAGTTGCAACCTACAAAGTGTGCTGGTCTCTAACCGATGCTGCAAGCTGCTTTGGTGCGGATGTGTTAGCTGCTATTGACCAAGCCATTAGTGATGGTGTTGATGTGATATCCATTTCCGCTGGAGGCAGAGCTAGTATTAGTCCTGAAGAAATATTTACAGATGAAATTTCTATAGGGGCATTCCATGCACTTGCTAGAAATATACTATTAGTTGCATCTGCAGGAAATGAAGGACCAACACCTGGAACTGTTTTGAATGTGGCTCCGTGGGTATTCACAGTTGCTGCTAGCACAATAGATAGGGACATTAGTAGTACTTTAACTTTTGGTAACAATCAACAAATCACGGGAGCCAGTCTTTTTGTAAACATACCACCTAACCAGTCCTTTACTCTGATCCTTGCTGCTGATGCTAAACTTGCCAATGCAACAAAACGTGATGCTCAACTTTGTAAGGCTGGAACACTTGATCCTGCAAAAGTAAAGGGAAAAATAGTGAGATGCCTTCGAGAAGGAAAAATAAAATCAGTTGCTGAGGGTCAGGAAGCTCTCTCTGCAGGCGCACAGGGAATGATTTTGGAAAATCAAAAGCAAAATGGGAATACACTTCTTTCTGAACCTCATGTTTTATCTACTGTCAACTATGCAAAGGGTCGTAATCCAACAAGGCCAAGTGGTTTTGACTTAACTGCCACGGACTCTACAATAAGCTCGTTTACTACAATAAGGATGTCCCCAGCAAAAACTTTCAATAGAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCTAGAGGACCCAATAAGATTCAGCCATCAATACTCAAGCCTGATATAACTGCACCTGGTGTGAACATACTTGCTGCCTATTCACCTGCCGCAAGTGCATCTGACCTACCATCAGACACTCGTCGAGGATTTCCATTCAATGTACTCCAAGGAACTTCTATGTCTTGCCCTCATATTGCTGGCATTGCTGGACTTCTCAAAACACTTCATCCTAGTTGGAGTCCTGCAGCTATTAAATCAGCAATCATGACCTCAGCAACCACACTAGATAACACCAACAGACCAATTAGGGATGCATTTGAGAATACATCAGCAACTCCATTCTCTTATGGTTCAGGACATGTTCAACCTGACCTTGCTGTAGATCCTGGACTTGTTTATGATCTAGGCCTTACTGATTACTTGAACTTCTTATGTGCTTCTGGTTATGACCAACAACTCATTTCCGCACTTAATTTCAATAGGGCATTTGTTTGTTCAAGATCTCAGAGCATAACAGACTTGAACTACCCTTCAATCACATTGCCAAATCTTGGGTTAAATGCAGTAAACGTTACTCGTACGGTCACCAACGTTGGGACACCAAGTACATATTTTGCAAATGCCCAATTGCCTGGATATAACATTGTTGTTGTACCAAATACCTTGAGTTTCAAGAAAATTGGTGAAAAGAAGATATTCCATGTGATTGTGCAAGCAAGGAGTGTGACTAAACAGGGAAATTATCAGTTTGGGGAATTGAGATGGACAAATGGAAAGCACATAGTCAGAAGTCCTATTACAGTTCGGCGCATATGA 2358 0.4173 MDRSNLYLLVSSVLVFTVLVNVVHASKQCYIVYLGAHSHGPTPSSVDLETATYSHYDLLGSILGSHEKAKEAIIYSYNRHINGFAAVLEEEEAAHIAKNPNVVSVFLSKEYRLHTTRSYEFLGLQRNGMNSAWQKGRFGENTIIANIDTGVWPESKSFSDQGIGTVPAKWRGGNVCQINKLRGSKNVPCNRKLIGARFFSKAYEAFNGKLPTSQQTARDFVGHGTHTLSTAGGNFVPGASVFAVGNGTAKGGSPRARVATYKVCWSLTDAASCFGADVLAAIDQAISDGVDVISISAGGRASISPEEIFTDEISIGAFHALARNILLVASAGNEGPTPGTVLNVAPWVFTVAASTIDRDISSTLTFGNNQQITGASLFVNIPPNQSFTLILAADAKLANATKRDAQLCKAGTLDPAKVKGKIVRCLREGKIKSVAEGQEALSAGAQGMILENQKQNGNTLLSEPHVLSTVNYAKGRNPTRPSGFDLTATDSTISSFTTIRMSPAKTFNRRKPAPVMASFSSRGPNKIQPSILKPDITAPGVNILAAYSPAASASDLPSDTRRGFPFNVLQGTSMSCPHIAGIAGLLKTLHPSWSPAAIKSAIMTSATTLDNTNRPIRDAFENTSATPFSYGSGHVQPDLAVDPGLVYDLGLTDYLNFLCASGYDQQLISALNFNRAFVCSRSQSITDLNYPSITLPNLGLNAVNVTRTVTNVGTPSTYFANAQLPGYNIVVVPNTLSFKKIGEKKIFHVIVQARSVTKQGNYQFGELRWTNGKHIVRSPITVRRI 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1975g00003 785 FunFam Subtilisin-like protease SBT5.3 19 114 - -
Gabi1975g00003 785 SUPERFAMILY Subtilisin-like 114 645 IPR036852 GO:0004252|GO:0006508
Gabi1975g00003 785 CDD PA_subtilisin_like 363 475 - -
Gabi1975g00003 785 FunFam Subtilisin-like protease SBT1.5 141 368 - -
Gabi1975g00003 785 Gene3D Peptidase S8/S53 domain 142 654 IPR036852 GO:0004252|GO:0006508
Gabi1975g00003 785 ProSiteProfiles Serine proteases, subtilase domain profile. 118 641 - -
Gabi1975g00003 785 PRINTS Subtilisin serine protease family (S8) signature 570 586 IPR015500 -
Gabi1975g00003 785 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Gabi1975g00003 785 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Gabi1975g00003 785 CDD Peptidases_S8_3 111 607 IPR034197 -
Gabi1975g00003 785 Pfam Subtilase family 139 612 IPR000209 GO:0006508|GO:0008236
Gabi1975g00003 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 571 581 IPR023828 -
Gabi1975g00003 785 Gene3D - 658 785 - -
Gabi1975g00003 785 Gene3D - 357 508 - -
Gabi1975g00003 785 Pfam Peptidase inhibitor I9 30 114 IPR010259 -
Gabi1975g00003 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 114 IPR037045 -
Gabi1975g00003 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 782 IPR045051 -
Gabi1975g00003 785 Pfam Fibronectin type-III domain 687 782 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1975g00003 Gabi-Chr1975 59852 64846 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1975g00003 17 783 Subtilisin-like Serine Gene Family AT5G59810 53.608 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1975g00003 - - gmx:100803751 1278.08