Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1975g00001 ATGGGTCACTCCATTTTATACCTTCTTGTTTTATCTTTTCTTGTTTTCACTTTGTTGCTGAGTACTGGTCATGCCAGCAAACAGTGCTACATTGTTTACTTGGGAGCACATTCTCATGGTCCAACCCCTTCATCTGTTGACCTTGAAACTGCAACATATTCTCATTATGATTTACTGGGTTCAATCTTGGGAAGCCATGAGAAGGCCAAAGAAGCAATTATTTATTCATACAATAGACACATCAATGGCTTTGCAGCTGTTCTTGAAGAGGAAGAAGCAGCACATATTATAAAAAAGCCAAACGTTATATCTGTGTTCTTGAGCAAAGAGTATAAACTGCACACTACCCGTTCATATGAGTTTCTTGGACTGCAAAGAAATGGTATGAACTCAGCATGGCAAAAGGGAAGATTTGGTGAAAATACAATTATCGCTAACATTGATACAGGAGTTTGGCCAGAATCCAAAAGTTTTAGGGACGATGGAATAGGCCCTGTCCCAGCAAAATGGCGTGGGGGTAATGTCTGTCAAATTGACAAACTCCGGGATTCAAAGAATGTTCCATGTAACAGGAAGCTAATTGGAGCAAGATTCTTCAGCAAAGCTTATGAGGCATTTAACGGCAAACTTCCCACATCACAACAAACAGCACGTGACTTTGTAGGACATGGTACACATACTCTATCAACCGCAGGTGGCAATTTTGTTCCTGGTGCAAGTGTCTTTGGTAATGCTAATGGCACTGCAAAGGGTGGATCCCCAAGAGCAAGAGTTGCAACCTACAAAGTGTGTTGGTCTCTAACCGATGCTGCAAGCTGCTATGGTGCGGATGTGTTAGCGGCTATTGACCAAGCCATAAGTGATGGTGTTGATTTGATATCCATTTCTGCTGGAGGCCGAACAAGTCTTAGTCCCGAAGATATATTTACAGATGAAATTTCCATAGGGGGATTCCATGCACTTGCTAGAAATATATTATTAGTTGCATCTGCAGGGAATGATGGACCAACACCTGGAACTGTTTTGAATGTTGCTCCATGGCTATTCACAGTTGCTGCTAGCACAATAGATAGGGACATCAGCAGTACTTTAACTTTTGGTAACAATCAACAAATCACGGGAGCCAGTCTTTTTGTAAACATACCACCTAACCAGTCCTTTACTCTGATCCTTGCTGCTGATGCTAAACTTGCCAATGCGACAAAACGTGATGCTCAACTTTGTAAGGCTGGAACACTTGATCCTGCAAAAGTAAATGGCAAAATAGTGAGATGCCTTCGAGAAGGAAAAATAAAATCAGTTGCTGAGGGTCAGGAAGCTTTATCTGCAGGCGCAAAGGGAATGATTTTGGAAAATCAAAAGCAAAATGGGAATACACTTCTTTCTGAGCCTCATGTTTTATCTACTGTGGCCTATGCAGACAGTCGAGGTCGAATAACAAATCCTCCGAGAAGTTTTGACTTAACTGCCACGGACTCTACAATAAGCTCGTTTACTACAATAAGGATGTCCCCAGCAAAAACTTTCAATAGAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCTAGAGGACCCAATACGATTCAGCCATCAATACTCAAGCCTGATATAACTGCACCAGGTGTGAACATACTTGCTGCCTATTCACCTGCCGCAAGTGCATCTGACCTACCATCAGACACTCGCCGAGGATTTCCGTTCAATGTACTCCAAGGAACTTCTATGTCTTGTCCTCATATTACTGGCATTGCTGGACTTCTCAAAACACTTCATCCTAGTTGGAGTCCTGCAGCTATTAAATCAGCAATCATGACCTCAGCAACCACACTGGATAACACCAATAGACCAATTAGGGATGCATTTGAGAACACATCAGCAACTCCATTCGCTTATGGTTCAGGACATGTTCAACCTGACCTTGCTATAGATCCTGGACTTGTTTATGATCTAGGCCTTACTGATTACTTGAACTTCTTATGTGCTTCTGGATATGACCGGCAACTCATTTCCGCACTTAATTTCAATAGGGCCTTTGTTTGTTCAAGATCTCAGAGCATAACAAACTTGAACTACCCTTCAATCACATTGCCAAATCTTGGGTTAAATGCAGTAAATGTTACTCGTACGGTCACCAATGTTGGGACACCAAGTACATATTTTGCAAATGCCCAATTGCCTGGATATAACATTGTTGTTGTACCGAATACCTTGAGTTTCAAGAAAATTGGTGAAAAGAAGACATTCCAGGTGATTGTGCAAGCAAGGAGTGTGACTAAGAGGGGAACTTATCAATTTGGGGAACTAAGATGGACAAATGGAAAGCACATAGTCAGAAGTCCTATAACAATTCGGCGCATATGA 2364 0.4184 MGHSILYLLVLSFLVFTLLLSTGHASKQCYIVYLGAHSHGPTPSSVDLETATYSHYDLLGSILGSHEKAKEAIIYSYNRHINGFAAVLEEEEAAHIIKKPNVISVFLSKEYKLHTTRSYEFLGLQRNGMNSAWQKGRFGENTIIANIDTGVWPESKSFRDDGIGPVPAKWRGGNVCQIDKLRDSKNVPCNRKLIGARFFSKAYEAFNGKLPTSQQTARDFVGHGTHTLSTAGGNFVPGASVFGNANGTAKGGSPRARVATYKVCWSLTDAASCYGADVLAAIDQAISDGVDLISISAGGRTSLSPEDIFTDEISIGGFHALARNILLVASAGNDGPTPGTVLNVAPWLFTVAASTIDRDISSTLTFGNNQQITGASLFVNIPPNQSFTLILAADAKLANATKRDAQLCKAGTLDPAKVNGKIVRCLREGKIKSVAEGQEALSAGAKGMILENQKQNGNTLLSEPHVLSTVAYADSRGRITNPPRSFDLTATDSTISSFTTIRMSPAKTFNRRKPAPVMASFSSRGPNTIQPSILKPDITAPGVNILAAYSPAASASDLPSDTRRGFPFNVLQGTSMSCPHITGIAGLLKTLHPSWSPAAIKSAIMTSATTLDNTNRPIRDAFENTSATPFAYGSGHVQPDLAIDPGLVYDLGLTDYLNFLCASGYDRQLISALNFNRAFVCSRSQSITNLNYPSITLPNLGLNAVNVTRTVTNVGTPSTYFANAQLPGYNIVVVPNTLSFKKIGEKKTFQVIVQARSVTKRGTYQFGELRWTNGKHIVRSPITIRRI 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1975g00001 787 Pfam Subtilase family 139 614 IPR000209 GO:0006508|GO:0008236
Gabi1975g00001 787 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Gabi1975g00001 787 PRINTS Subtilisin serine protease family (S8) signature 572 588 IPR015500 -
Gabi1975g00001 787 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Gabi1975g00001 787 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 114 IPR037045 -
Gabi1975g00001 787 SUPERFAMILY Subtilisin-like 114 647 IPR036852 GO:0004252|GO:0006508
Gabi1975g00001 787 CDD PA_subtilisin_like 363 475 - -
Gabi1975g00001 787 CDD Peptidases_S8_3 111 609 IPR034197 -
Gabi1975g00001 787 FunFam Subtilisin-like protease SBT5.3 19 114 - -
Gabi1975g00001 787 ProSiteProfiles Serine proteases, subtilase domain profile. 118 643 - -
Gabi1975g00001 787 ProSitePatterns Serine proteases, subtilase family, serine active site. 573 583 IPR023828 -
Gabi1975g00001 787 FunFam Subtilisin-like protease SBT1.5 141 368 - -
Gabi1975g00001 787 Gene3D - 357 510 - -
Gabi1975g00001 787 Gene3D - 660 786 - -
Gabi1975g00001 787 Pfam Fibronectin type-III domain 689 784 IPR041469 -
Gabi1975g00001 787 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 783 IPR045051 -
Gabi1975g00001 787 Gene3D Peptidase S8/S53 domain 142 656 IPR036852 GO:0004252|GO:0006508
Gabi1975g00001 787 Pfam Peptidase inhibitor I9 30 114 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1975g00001 Gabi-Chr1975 33684 39454 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1975g00001 30 785 Subtilisin-like Serine Gene Family AT2G04160 52.468 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1975g00001 - - gmx:100803751 1272.69